Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B08
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   150   3e-36
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   150   3e-36
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   150   3e-36
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   149   6e-36
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   144   2e-34
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   126   3e-29
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    40   0.004
AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.             29   7.3  

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  150 bits (363), Expect = 3e-36
 Identities = 71/148 (47%), Positives = 87/148 (58%)
 Frame = +2

Query: 50  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 229
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 230 FHFXKNKNFCPVLNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 409
           +H  +N++FCP +NL KLWTLVSEQT +  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 410 PVIVXXXXXXXXXXXXIXDVGGACVLSA 493
           PVIV            I  VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  150 bits (363), Expect = 3e-36
 Identities = 71/148 (47%), Positives = 87/148 (58%)
 Frame = +2

Query: 50  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 229
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 230 FHFXKNKNFCPVLNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 409
           +H  +N++FCP +NL KLWTLVSEQT +  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 410 PVIVXXXXXXXXXXXXIXDVGGACVLSA 493
           PVIV            I  VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  150 bits (363), Expect = 3e-36
 Identities = 71/148 (47%), Positives = 87/148 (58%)
 Frame = +2

Query: 50  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 229
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 230 FHFXKNKNFCPVLNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 409
           +H  +N++FCP +NL KLWTLVSEQT +  A    G  P+I++V++           PKQ
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQ 120

Query: 410 PVIVXXXXXXXXXXXXIXDVGGACVLSA 493
           PVIV            I  VGGACVL A
Sbjct: 121 PVIVKAKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  149 bits (361), Expect = 6e-36
 Identities = 70/143 (48%), Positives = 85/143 (59%)
 Frame = +2

Query: 65  KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFXK 244
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H  +
Sbjct: 5   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64

Query: 245 NKNFCPVLNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 424
           N++FCP +NL KLWTLVSEQT +  A    G  P+I++V++           PKQPVIV 
Sbjct: 65  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 124

Query: 425 XXXXXXXXXXXIXDVGGACVLSA 493
                      I  VGGACVL A
Sbjct: 125 AKFFSRRAEEKIKSVGGACVLVA 147


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  144 bits (348), Expect = 2e-34
 Identities = 69/148 (46%), Positives = 86/148 (58%)
 Frame = +2

Query: 50  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 229
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 230 FHFXKNKNFCPVLNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQ 409
           ++  +N++FCP +NL KLWTLVSEQT +  A    G  P+I++V++            KQ
Sbjct: 61  YNLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQ 120

Query: 410 PVIVXXXXXXXXXXXXIXDVGGACVLSA 493
           PVIV            I  VGGACVL A
Sbjct: 121 PVIVKAKLFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  126 bits (305), Expect = 3e-29
 Identities = 55/106 (51%), Positives = 71/106 (66%)
 Frame = +2

Query: 50  MATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRN 229
           M +  +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++
Sbjct: 1   MPSRLRKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKH 60

Query: 230 FHFXKNKNFCPVLNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKA 367
           +H  +N++FCP +NL KLWTLVSEQT +  A    G  P+I++V++
Sbjct: 61  YHLKRNQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 40.3 bits (90), Expect = 0.004
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = +2

Query: 266 LNLXKLWTLVSEQTXLKYASAPDGKVPVINIVKA 367
           +NL KLWTLVSEQT +  A    G  P+I++V++
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


>AY358091-1|AAQ88458.1|  126|Homo sapiens VFLL3057 protein.
          Length = 126

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 219 PSLPKYPGWYLSMLIL*WCSPPALPRPPGCLRCFPIRPCP---*LT*PLSFLVF 67
           P+LPK+PG  ++ L   W S    P P G +    + PCP       PL FLV+
Sbjct: 55  PALPKWPGHLMAELQGPWLSLAHCPSPSGPI----VLPCPFRVQFEPPLQFLVW 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,991,540
Number of Sequences: 237096
Number of extensions: 1341856
Number of successful extensions: 2644
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)