Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B07
         (362 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14973-1|AAA85661.1|   56|Homo sapiens ribosomal protein S29 pro...   100   1e-21
L31610-1|AAB27426.1|   56|Homo sapiens protein ( Homo sapiens (c...   100   1e-21
BC035313-1|AAH35313.1|   56|Homo sapiens ribosomal protein S29 p...   100   1e-21
BC032813-1|AAH32813.1|   56|Homo sapiens ribosomal protein S29 p...   100   1e-21
AB061847-1|BAB79485.1|   56|Homo sapiens ribosomal protein S29 p...   100   1e-21
AB007165-1|BAA25827.1|   26|Homo sapiens ribosomal protein S29 p...    46   3e-05
BC047704-1|AAH47704.1|  183|Homo sapiens SPATA3 protein protein.       29   5.9  
AY032925-1|AAK54455.1|  183|Homo sapiens testis and spermatogene...    29   5.9  
AK093385-1|BAC04149.1|  192|Homo sapiens protein ( Homo sapiens ...    29   5.9  

>U14973-1|AAA85661.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 86  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXXYAHDIXFXXLD 253
           MGH  +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCF  YA DI F  LD
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56


>L31610-1|AAB27426.1|   56|Homo sapiens protein ( Homo sapiens
           (clone cori-1cl5) S29 ribosomal protein mRNA, complete
           cds. ).
          Length = 56

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 86  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXXYAHDIXFXXLD 253
           MGH  +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCF  YA DI F  LD
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56


>BC035313-1|AAH35313.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 86  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXXYAHDIXFXXLD 253
           MGH  +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCF  YA DI F  LD
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56


>BC032813-1|AAH32813.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 86  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXXYAHDIXFXXLD 253
           MGH  +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCF  YA DI F  LD
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56


>AB061847-1|BAB79485.1|   56|Homo sapiens ribosomal protein S29
           protein.
          Length = 56

 Score =  100 bits (240), Expect = 1e-21
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = +2

Query: 86  MGHANIWYSHPRRYGQGSRSCRSCSNRHGLIRKYGLNICRQCFXXYAHDIXFXXLD 253
           MGH  +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQCF  YA DI F  LD
Sbjct: 1   MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56


>AB007165-1|BAA25827.1|   26|Homo sapiens ribosomal protein S29
           protein.
          Length = 26

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 19/24 (79%), Positives = 20/24 (83%)
 Frame = +2

Query: 170 GLIRKYGLNICRQCFXXYAHDIXF 241
           GLIRKYGLN+CRQCF  YA DI F
Sbjct: 1   GLIRKYGLNMCRQCFRQYAKDIGF 24


>BC047704-1|AAH47704.1|  183|Homo sapiens SPATA3 protein protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 197 CSNRTCGLSHACWSRIGM 144
           CS  TC  S ACW R+G+
Sbjct: 102 CSCATCPCSSACWRRLGL 119


>AY032925-1|AAK54455.1|  183|Homo sapiens testis and spermatogenesis
           cell apoptosis related protein 1 protein.
          Length = 183

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 197 CSNRTCGLSHACWSRIGM 144
           CS  TC  S ACW R+G+
Sbjct: 102 CSCATCPCSSACWRRLGL 119


>AK093385-1|BAC04149.1|  192|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36066 fis, clone TESTI2019257. ).
          Length = 192

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 197 CSNRTCGLSHACWSRIGM 144
           CS  TC  S ACW R+G+
Sbjct: 111 CSCATCPCSSACWRRLGL 128


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,753,370
Number of Sequences: 237096
Number of extensions: 733928
Number of successful extensions: 1675
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1675
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2248517154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)