Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B06
         (572 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   3.2  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.3  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   9.9  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 519 N*KVLFSHFVKYQLGKSELTNSSPKMESK 433
           N K    HF+   LG   LT++ PK +++
Sbjct: 98  NTKSFIYHFLHSWLGTGLLTSAGPKWQNR 126


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 498 HFVKYQLGKSELTNSSPKMESKTFTCS 418
           +++K QL  S  + SSP + S T+T S
Sbjct: 187 NYIKPQLHVSTGSTSSPTIASATYTNS 213


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 519 N*KVLFSHFVKYQLGKSELTNSSPKMESK 433
           N K    HF+   LG   LT+  PK +++
Sbjct: 98  NTKSFIYHFLHSWLGTGLLTSRGPKWQNR 126


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 286 LLGS*CNCVHVN*EHRHDSHKCQN 215
           L+G   NCV V  E  + SH CQN
Sbjct: 251 LIGLIKNCVIVIFELYYLSHVCQN 274


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 189 RYNSLGGAFIN 157
           R N LGG FIN
Sbjct: 41  RVNQLGGVFIN 51


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 388 QTSRCCYHTYRAG 426
           ++ RCCYH    G
Sbjct: 611 RSRRCCYHAVAPG 623


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 388 QTSRCCYHTYRAG 426
           ++ RCCYH    G
Sbjct: 503 RSRRCCYHAVAPG 515


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 143 FTLPAFMKAPPNELYRRLLPAMLFVLTFVTVMT 241
           + L   + + P E+    +PAM  VL  + VMT
Sbjct: 169 YLLTVAVNSIPGEVGGYDIPAMSNVLDIINVMT 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,113
Number of Sequences: 336
Number of extensions: 2909
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)