Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_B06
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L31886-1|AAB04161.1|  597|Drosophila melanogaster Star protein.        74   1e-13
AY113201-1|AAM29206.1|  597|Drosophila melanogaster AT04225p pro...    74   1e-13
AE014134-192|AAN10478.1|  597|Drosophila melanogaster CG4385-PB,...    74   1e-13
AE014134-191|AAF51425.1|  597|Drosophila melanogaster CG4385-PA,...    74   1e-13
BT015305-1|AAT94533.1| 1256|Drosophila melanogaster AT15166p pro...    28   7.8  
AY058520-1|AAL13749.1| 1256|Drosophila melanogaster LD22771p pro...    28   7.8  
AE014297-1371|AAN13524.1| 1256|Drosophila melanogaster CG6923-PB...    28   7.8  
AE014297-1370|AAF54693.1| 1256|Drosophila melanogaster CG6923-PA...    28   7.8  

>L31886-1|AAB04161.1|  597|Drosophila melanogaster Star protein.
          Length = 597

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/64 (51%), Positives = 45/64 (70%)
 Frame = +2

Query: 185 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFRLNMTRDYELARIGQGSAALIAYVR 364
           YR+LLP  L +L+F  V   L++YMDT  +  QQFRLNM+RDYEL  + Q   ALI ++R
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFRLNMSRDYELNGVAQDDPALIDFLR 336

Query: 365 QLHL 376
           Q+H+
Sbjct: 337 QIHM 340


>AY113201-1|AAM29206.1|  597|Drosophila melanogaster AT04225p
           protein.
          Length = 597

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/64 (51%), Positives = 45/64 (70%)
 Frame = +2

Query: 185 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFRLNMTRDYELARIGQGSAALIAYVR 364
           YR+LLP  L +L+F  V   L++YMDT  +  QQFRLNM+RDYEL  + Q   ALI ++R
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFRLNMSRDYELNGVAQDDPALIDFLR 336

Query: 365 QLHL 376
           Q+H+
Sbjct: 337 QIHM 340


>AE014134-192|AAN10478.1|  597|Drosophila melanogaster CG4385-PB,
           isoform B protein.
          Length = 597

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/64 (51%), Positives = 45/64 (70%)
 Frame = +2

Query: 185 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFRLNMTRDYELARIGQGSAALIAYVR 364
           YR+LLP  L +L+F  V   L++YMDT  +  QQFRLNM+RDYEL  + Q   ALI ++R
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFRLNMSRDYELNGVAQDDPALIDFLR 336

Query: 365 QLHL 376
           Q+H+
Sbjct: 337 QIHM 340


>AE014134-191|AAF51425.1|  597|Drosophila melanogaster CG4385-PA,
           isoform A protein.
          Length = 597

 Score = 74.1 bits (174), Expect = 1e-13
 Identities = 33/64 (51%), Positives = 45/64 (70%)
 Frame = +2

Query: 185 YRRLLPAMLFVLTFVTVMTMLLIYMDTVALGAQQFRLNMTRDYELARIGQGSAALIAYVR 364
           YR+LLP  L +L+F  V   L++YMDT  +  QQFRLNM+RDYEL  + Q   ALI ++R
Sbjct: 277 YRQLLPIALCLLSFAAVFATLIVYMDTTEIRHQQFRLNMSRDYELNGVAQDDPALIDFLR 336

Query: 365 QLHL 376
           Q+H+
Sbjct: 337 QIHM 340


>BT015305-1|AAT94533.1| 1256|Drosophila melanogaster AT15166p protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 401  HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLSGTVGLLMQLCPC 255
            H  +W  Q ++   HRR M P+P DL   A    S L    G L  +C C
Sbjct: 990  HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRN--GYLHSICSC 1037


>AY058520-1|AAL13749.1| 1256|Drosophila melanogaster LD22771p protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 401  HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLSGTVGLLMQLCPC 255
            H  +W  Q ++   HRR M P+P DL   A    S L    G L  +C C
Sbjct: 990  HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRN--GYLHSICSC 1037


>AE014297-1371|AAN13524.1| 1256|Drosophila melanogaster CG6923-PB,
            isoform B protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 401  HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLSGTVGLLMQLCPC 255
            H  +W  Q ++   HRR M P+P DL   A    S L    G L  +C C
Sbjct: 990  HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRN--GYLHSICSC 1037


>AE014297-1370|AAF54693.1| 1256|Drosophila melanogaster CG6923-PA,
            isoform A protein.
          Length = 1256

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -1

Query: 401  HLEVWNEQSNVVV*HRRSMLPSP-DLYEPAHSHGSCLSGTVGLLMQLCPC 255
            H  +W  Q ++   HRR M P+P DL   A    S L    G L  +C C
Sbjct: 990  HQNLWYRQQSMQEMHRRHMTPTPIDLSSNAPLLTSTLRN--GYLHSICSC 1037


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,635,735
Number of Sequences: 53049
Number of extensions: 563482
Number of successful extensions: 1270
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)