Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_B05
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 95 4e-20
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 63 2e-10
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 57 9e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 56 2e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 56 2e-08
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 55 5e-08
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 52 4e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 52 5e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 52 5e-07
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 51 8e-07
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 50 1e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 49 3e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 48 6e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 48 6e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 48 6e-06
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 45 4e-05
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 45 4e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 45 4e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 45 4e-05
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 45 4e-05
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 45 5e-05
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 45 5e-05
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 45 5e-05
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 44 7e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 44 7e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 44 7e-05
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 44 9e-05
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 44 9e-05
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 44 1e-04
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 44 1e-04
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 44 1e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 44 1e-04
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 43 2e-04
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 42 4e-04
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 41 7e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 41 7e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 9e-04
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 40 0.001
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 40 0.001
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 39 0.003
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 37 0.014
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 37 0.014
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 29 2.8
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 29 2.8
AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical ... 29 3.8
AL161712-13|CAC70137.1| 830|Caenorhabditis elegans Hypothetical... 28 6.6
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 27 8.7
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 27 8.7
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 95.1 bits (226), Expect = 4e-20
Identities = 45/78 (57%), Positives = 59/78 (75%)
Frame = +1
Query: 415 LSDQKFTALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAF 594
L+ F +LEG V L ++ +GF TMTEIQAK+I PLLEG+D++ +AKTGSGKTLAF
Sbjct: 63 LTKTTFASLEGKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAF 122
Query: 595 LIPAIXLIYKLKFKPRNG 648
L+PAI L++KL +K NG
Sbjct: 123 LLPAIELLHKLNWKQHNG 140
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/62 (50%), Positives = 40/62 (64%)
Frame = +1
Query: 463 TLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLKFKPR 642
TL G+KD + TEIQ I L G D+VGAAKTGSGKTLA +IP + +++ K+ P
Sbjct: 87 TLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPD 146
Query: 643 NG 648
G
Sbjct: 147 YG 148
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 57.2 bits (132), Expect = 9e-09
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
+K + T IQA+AIP ++ GRD++G AKTGSGKTLAFL+P
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLP 361
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 415 LSDQKFTALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAF 594
++ +KF+ L VC ++ M T T +QA IP +LEG D++G A+TG+GKTLAF
Sbjct: 86 MTTKKFSQLG--VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 595 LIPAIXLIYKLKFKP 639
IP ++ KL P
Sbjct: 144 AIP---ILQKLSVDP 155
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 56.0 bits (129), Expect = 2e-08
Identities = 31/75 (41%), Positives = 45/75 (60%)
Frame = +1
Query: 415 LSDQKFTALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAF 594
++ +KF+ L VC ++ M T T +QA IP +LEG D++G A+TG+GKTLAF
Sbjct: 86 MTTKKFSQLG--VCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAF 143
Query: 595 LIPAIXLIYKLKFKP 639
IP ++ KL P
Sbjct: 144 AIP---ILQKLSVDP 155
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKL 627
+K++G++ T IQ +AIP L+ RD++G A+TGSGKT AFL+P + I L
Sbjct: 316 VKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSL 366
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 54.8 bits (126), Expect = 5e-08
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +1
Query: 478 KDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLKFK 636
K G VT T IQ + IP L GRD++G A TGSGKT+ F++P + + + K
Sbjct: 206 KQKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMK 258
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 52.0 bits (119), Expect = 4e-07
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +1
Query: 502 TEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
T IQA AIP L GRD++G AKTGSGKT A+L PAI
Sbjct: 289 TPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAI 324
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLKFKPRNG 648
I+ GF T IQ K IP +++G+D+V ++TGSGKT AF+IP ++ KLK + G
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIP---MLQKLKRRDTTG 93
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 51.6 bits (118), Expect = 5e-07
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLKFKPRNG 648
I+ GF T IQ K IP +++G+D+V ++TGSGKT AF+IP ++ KLK + G
Sbjct: 39 IEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIP---MLQKLKRRDTTG 93
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 50.8 bits (116), Expect = 8e-07
Identities = 23/45 (51%), Positives = 33/45 (73%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
I+ GF + IQ++ P LL G+D +G ++TGSGKTLAFL+PA+
Sbjct: 99 IRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPAL 143
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +1
Query: 466 LLGIKDMGFVTMTEIQAKAIPPLLEGR-DLVGAAKTGSGKTLAFLIPAI 609
L I+ MGF TEIQ+ +P + R D++GAA+TGSGKTLAF IP +
Sbjct: 167 LEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 215
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLI 618
IK G+ T +Q +IP L GRDL+ A+TGSGKT AFL+P + I
Sbjct: 181 IKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNAI 228
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +1
Query: 451 VCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
V +P + +G++ ++IQ A+P L+G+D++G A+TGSGKT AF IP +
Sbjct: 51 VSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVL 103
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +1
Query: 421 DQKFTALEGTVCEPTLLG-IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFL 597
D + T+ + PT+L +K + + + IQ IP +L+G D++G A+T +GKT AF
Sbjct: 377 DVRLTSWTNSGLHPTILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFG 436
Query: 598 IPAIXLIYKLKFKPRN 645
+P I I ++ + RN
Sbjct: 437 LPIIDKILRMDEETRN 452
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +1
Query: 490 FVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLKFKPR 642
F T IQ+ + P + GRD++ AKTGSGKTLAF++PA+ I K + R
Sbjct: 149 FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQR 199
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 487 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
G+ T +Q +IP LL RDL+ A+TGSGKT AFL+P I
Sbjct: 158 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 198
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 487 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
G+ T +Q +IP LL RDL+ A+TGSGKT AFL+P I
Sbjct: 142 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 182
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 487 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
G+ T +Q +IP LL RDL+ A+TGSGKT AFL+P I
Sbjct: 139 GYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPII 179
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/60 (38%), Positives = 36/60 (60%)
Frame = +1
Query: 460 PTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLKFKP 639
P LL + D + + T++Q + LL D+V + TGSGKTLAF++P + +I K +P
Sbjct: 19 PELLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMIQNAKLQP 78
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 433 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT AFL+P
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 433 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT AFL+P
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+K M T IQ + P++ G D+V A TGSGKTLAFLIP +
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/45 (48%), Positives = 28/45 (62%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+K M T IQ + P++ G D+V A TGSGKTLAFLIP +
Sbjct: 751 LKRMKMNRPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFV 795
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 45.2 bits (102), Expect = 4e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +1
Query: 433 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
T E + E + G+ T IQ A+P + +G D++ A+TGSGKT AFL+P
Sbjct: 342 TFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
++ G+ T IQ +P + +G+D++ A+TGSGKT AFL+P
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 44.8 bits (101), Expect = 5e-05
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
E L I ++G+ ++Q I LE ++++G A+TGSGKT AFLIP +
Sbjct: 98 ERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLV 148
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
++ G+ T IQ +P + +G+D++ A+TGSGKT AFL+P
Sbjct: 313 VERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Frame = +1
Query: 460 PTLLG-IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYKLK 630
P+LL + + + IQ ++IP + E R+++ +A TGSGKTLAF +P I I +LK
Sbjct: 135 PSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELK 192
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 433 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
T E + E + G+ T IQ +P + +G D++ A+TGSGKT AFL+P
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 433 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
T E + E + G+ T IQ +P + +G D++ A+TGSGKT AFL+P
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/57 (36%), Positives = 31/57 (54%)
Frame = +1
Query: 433 TALEGTVCEPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIP 603
T E + E + G+ T IQ +P + +G D++ A+TGSGKT AFL+P
Sbjct: 553 TFSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLP 609
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 44.0 bits (99), Expect = 9e-05
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
E L GI GF + IQ +AIP +L+ RD++ A++G+GKT F I +
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVL 85
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 44.0 bits (99), Expect = 9e-05
Identities = 19/50 (38%), Positives = 33/50 (66%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYK 624
+ + + T +Q++AIP +L G D + AA+TGSGKT AF +P ++++
Sbjct: 17 LSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQIVWE 66
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Frame = +1
Query: 490 FVTMTEIQAKAIPPLLEGR-DLVGAAKTGSGKTLAFLIPAI 609
F TEIQ+ +P + R D++GAA+TGSGKTLAF IP +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLV 48
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+ TL +K+ F + +QA+AIP L GRD++ AK+G+GKTL F + A+
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAV 81
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+ TL +K+ F + +QA+AIP L GRD++ AK+G+GKTL F + A+
Sbjct: 31 QKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAV 81
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
E L GI GF + IQ +A+P +L+ RD++ A++G+GKT F I +
Sbjct: 35 EDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVL 85
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +1
Query: 487 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI-XLIYKLK 630
G+ T IQ IP L G+D+ A TG+GKT AF++P + +IY+ K
Sbjct: 167 GYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPK 215
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 41.9 bits (94), Expect = 4e-04
Identities = 23/50 (46%), Positives = 28/50 (56%)
Frame = +1
Query: 475 IKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLIYK 624
+K + T +Q +I + EGR LV A TG GKT AFLIPAI K
Sbjct: 108 LKCVHVTTFNAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALK 157
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLI 618
E L GI GF + IQ +AI P G+D++ A++G+GKT F + + I
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRI 91
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/54 (37%), Positives = 30/54 (55%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLI 618
E L GI GF + IQ +AI P G+D++ A++G+GKT F + + I
Sbjct: 38 EELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRI 91
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.7 bits (91), Expect = 9e-04
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 466 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXLI 618
L+GI + G+ + IQ +I L G+D++ AK G+GKT A+ IP I I
Sbjct: 55 LMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI 105
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 466 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
L I D GF +E+Q + IP + G D+V AK+G GKT F+I +
Sbjct: 53 LRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTL 100
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 466 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
L I D GF +E+Q + IP + G D+V AK+G GKT F+I +
Sbjct: 53 LRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTL 100
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 466 LLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
L I D GF +E+Q + IP + G D+V AK+G GKT F+I +
Sbjct: 52 LRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTL 99
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = +1
Query: 508 IQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+Q +I + EGR LV A TG GKT AFLIPAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 36.7 bits (81), Expect = 0.014
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +1
Query: 457 EPTLLGIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLI 600
E L GI GF + IQ A+ P G+D+ ++ GSGKT+ LI
Sbjct: 5 EELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLI 52
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 36.7 bits (81), Expect = 0.014
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = +1
Query: 499 MTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXL 615
+ +Q K+I + + R L+ A TG GKT AFLIPAI +
Sbjct: 115 LNAVQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEI 153
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 526 PPLLEGRDLVGAAKTGSGKTLAFLIPAIXLI 618
PP L RD+ AA TGSGKT+ +++P + +
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAV 181
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 511 QAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
Q + + P LEG++ V A TGSGKT + A+
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKTEVAIYAAL 407
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 487 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXL 615
GF Q + I L G D TG+GK+L + +PA+ L
Sbjct: 244 GFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVIL 286
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 487 GFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAIXL 615
GF Q + I L G D TG+GK+L + +PA+ L
Sbjct: 244 GFNQFRHRQKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAVIL 286
>AF025458-2|AAB70978.1| 557|Caenorhabditis elegans Hypothetical
protein C01B12.5 protein.
Length = 557
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 389 LDQASA*VYYQIKNSLHWKAQCANQLF*ELKIWAL 493
LD A++ ++ QIK L WK ++ EL IW L
Sbjct: 7 LDVATSGLFTQIKVLLRWKGSVWKSIWSELLIWLL 41
>AL161712-13|CAC70137.1| 830|Caenorhabditis elegans Hypothetical
protein Y66D12A.17 protein.
Length = 830
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = -3
Query: 647 PFLGLNFSLYIRXIAGIKKASVFPEPVLAAPTRSLPS 537
PFLG L I + +KK+ F P+L+ R+LP+
Sbjct: 209 PFLGGKIPLKIHFL--VKKSQKFSHPILSGINRALPT 243
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 508 IQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+Q AI ++ D V TG GK+L + +PA+
Sbjct: 90 LQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 508 IQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPAI 609
+Q AI ++ D V TG GK+L + +PA+
Sbjct: 113 LQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,771,327
Number of Sequences: 27780
Number of extensions: 170673
Number of successful extensions: 437
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 436
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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