Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_B02
(352 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29 pro... 58 6e-09
U49083-1|AAC50647.1| 159|Homo sapiens HIP protein. 58 6e-09
U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29 pro... 58 6e-09
BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29 p... 58 6e-09
BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29 p... 58 6e-09
BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29 p... 58 6e-09
BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29 p... 58 6e-09
BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29 p... 58 6e-09
AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA seq... 58 6e-09
CR542080-1|CAG46877.1| 370|Homo sapiens TPST1 protein. 29 5.5
CR542060-1|CAG46857.1| 370|Homo sapiens TPST1 protein. 29 5.5
BC013188-1|AAH13188.1| 370|Homo sapiens tyrosylprotein sulfotra... 29 5.5
AF038009-1|AAC13552.1| 370|Homo sapiens tyrosylprotein sulfotra... 29 5.5
AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein. 29 5.5
X63547-2|CAA45111.1| 1089|Homo sapiens oncogene protein. 28 9.5
X63546-2|CAA45109.1| 586|Homo sapiens oncogene protein. 28 9.5
AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific prot... 28 9.5
AK025690-1|BAB15219.1| 746|Homo sapiens protein ( Homo sapiens ... 28 9.5
>Z49148-1|CAA89008.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>U49083-1|AAC50647.1| 159|Homo sapiens HIP protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>U10248-1|AAC50499.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>BC071909-1|AAH71909.1| 161|Homo sapiens ribosomal protein L29
protein.
Length = 161
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>BC071663-1|AAH71663.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>BC070481-1|AAH70481.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>BC070190-1|AAH70190.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>BC008926-1|AAH08926.1| 159|Homo sapiens ribosomal protein L29
protein.
Length = 159
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 1 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 31
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 35 VDPKFLRNMRFAKKHN 50
>AL450405-1|CAI16223.1| 172|Homo sapiens protein ( Human DNA
sequence from clone RP11-632C17 on chromosome 6 Contains
the gene for a novel protein similar to ribosomal
protein L29 ).
Length = 172
Score = 58.4 bits (135), Expect = 6e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHES 141
MAKSKNHT HNQ+RK HRNGIKKPR R+ES
Sbjct: 16 MAKSKNHTTHNQSRKWHRNGIKKPRSQRYES 46
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 152 MDPKFLRNQRFCKKGN 199
+DPKFLRN RF KK N
Sbjct: 50 VDPKFLRNMRFAKKHN 65
>CR542080-1|CAG46877.1| 370|Homo sapiens TPST1 protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPL--RMDPKFLRNQRFCKKG 196
SKW + ++ A + M++K P NPP + DPK + N R KG
Sbjct: 300 SKWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKG 352
>CR542060-1|CAG46857.1| 370|Homo sapiens TPST1 protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPL--RMDPKFLRNQRFCKKG 196
SKW + ++ A + M++K P NPP + DPK + N R KG
Sbjct: 300 SKWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKG 352
>BC013188-1|AAH13188.1| 370|Homo sapiens tyrosylprotein
sulfotransferase 1 protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPL--RMDPKFLRNQRFCKKG 196
SKW + ++ A + M++K P NPP + DPK + N R KG
Sbjct: 300 SKWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKG 352
>AF038009-1|AAC13552.1| 370|Homo sapiens tyrosylprotein
sulfotransferase-1 protein.
Length = 370
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 44 SKWQSQRIIQIITKTAKLTEMVSKSQGRPGTNPPL--RMDPKFLRNQRFCKKG 196
SKW + ++ A + M++K P NPP + DPK + N R KG
Sbjct: 300 SKWVGKIPPDVLQDMAVIAPMLAKLGYDPYANPPNYGKPDPKIIENTRRVYKG 352
>AB040880-1|BAA95971.1| 1721|Homo sapiens KIAA1447 protein protein.
Length = 1721
Score = 28.7 bits (61), Expect = 5.5
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 37 KLIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 147
+L ++ + +H +R R G +PRK +H S+L
Sbjct: 715 ELARLQRKHDHERDESSRSPARRGPGRPRKRKHSSSL 751
>X63547-2|CAA45111.1| 1089|Homo sapiens oncogene protein.
Length = 1089
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 208 WLQVTLLAKPLIP*KFWIHAQ 146
W+QV+ LA+PL P + IHAQ
Sbjct: 604 WIQVSWLARPLPPQEASIHAQ 624
>X63546-2|CAA45109.1| 586|Homo sapiens oncogene protein.
Length = 586
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 208 WLQVTLLAKPLIP*KFWIHAQ 146
W+QV+ LA+PL P + IHAQ
Sbjct: 101 WIQVSWLARPLPPQEASIHAQ 121
>AY143550-1|AAN38838.1| 1406|Homo sapiens ubiquitin-specific
protease USP6 protein.
Length = 1406
Score = 27.9 bits (59), Expect = 9.5
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -1
Query: 208 WLQVTLLAKPLIP*KFWIHAQ 146
W+QV+ LA+PL P + IHAQ
Sbjct: 921 WIQVSWLARPLPPQEASIHAQ 941
>AK025690-1|BAB15219.1| 746|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22037 fis, clone HEP08868. ).
Length = 746
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +1
Query: 124 KTRHESTLAHGSKIFKESKVLQEG*PEASQATREGG 231
KT +E +L H + KE+K LQE + EGG
Sbjct: 648 KTAYEESLEHLESVKKENKTLQEEIKDLIDQLGEGG 683
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,161,401
Number of Sequences: 237096
Number of extensions: 718396
Number of successful extensions: 1841
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2084089752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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