Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_B02
(352 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein. 69 1e-12
AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-P... 69 1e-12
AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-P... 69 1e-12
AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-P... 69 1e-12
AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p pro... 67 5e-12
EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein. 28 3.8
BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p pro... 28 3.8
AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA... 28 3.8
AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA... 27 5.1
BT016019-1|AAV36904.1| 1218|Drosophila melanogaster RE16243p pro... 27 6.7
AY051856-1|AAK93280.1| 874|Drosophila melanogaster LD35413p pro... 27 6.7
AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched p... 27 6.7
AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB... 27 6.7
AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA... 27 6.7
AE014297-1406|AAF54719.2| 874|Drosophila melanogaster CG31211-P... 27 6.7
AE014297-1405|AAO41546.1| 893|Drosophila melanogaster CG31211-P... 27 6.7
AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA ... 27 6.7
BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p pro... 27 8.9
AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p pro... 27 8.9
AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-P... 27 8.9
AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-P... 27 8.9
>U40226-1|AAB01760.1| 76|Drosophila melanogaster L43 protein.
Length = 76
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFKESKVLQEG 195
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL K + ++G
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49
Score = 30.3 bits (65), Expect = 0.72
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 146 LRMDPKFLRNQRFCKKGNL 202
L MD KFL NQR+ +KGNL
Sbjct: 33 LGMDVKFLINQRYARKGNL 51
>AE013599-3176|AAF46708.1| 76|Drosophila melanogaster CG10071-PC,
isoform C protein.
Length = 76
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFKESKVLQEG 195
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL K + ++G
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49
Score = 30.3 bits (65), Expect = 0.72
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 146 LRMDPKFLRNQRFCKKGNL 202
L MD KFL NQR+ +KGNL
Sbjct: 33 LGMDVKFLINQRYARKGNL 51
>AE013599-3175|AAM70864.1| 76|Drosophila melanogaster CG10071-PB,
isoform B protein.
Length = 76
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFKESKVLQEG 195
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL K + ++G
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49
Score = 30.3 bits (65), Expect = 0.72
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 146 LRMDPKFLRNQRFCKKGNL 202
L MD KFL NQR+ +KGNL
Sbjct: 33 LGMDVKFLINQRYARKGNL 51
>AE013599-3174|AAM70863.1| 76|Drosophila melanogaster CG10071-PA,
isoform A protein.
Length = 76
Score = 69.3 bits (162), Expect = 1e-12
Identities = 30/49 (61%), Positives = 36/49 (73%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHGSKIFKESKVLQEG 195
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL K + ++G
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTLGMDVKFLINQRYARKG 49
Score = 30.3 bits (65), Expect = 0.72
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2
Query: 146 LRMDPKFLRNQRFCKKGNL 202
L MD KFL NQR+ +KGNL
Sbjct: 33 LGMDVKFLINQRYARKGNL 51
>AY075553-1|AAL68360.1| 56|Drosophila melanogaster RH58777p
protein.
Length = 56
Score = 67.3 bits (157), Expect = 5e-12
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +1
Query: 49 MAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTL 147
MAKSKNHTNHNQN+KAHRNGIK+P + RHESTL
Sbjct: 1 MAKSKNHTNHNQNKKAHRNGIKRPLRKRHESTL 33
>EF058034-1|ABL84969.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058033-1|ABL84968.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058032-1|ABL84967.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058031-1|ABL84966.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058030-1|ABL84965.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058029-1|ABL84964.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058028-1|ABL84963.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058027-1|ABL84962.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058026-1|ABL84961.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058025-1|ABL84960.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>EF058024-1|ABL84959.1| 796|Drosophila melanogaster Nup153 protein.
Length = 796
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>BT025178-1|ABE98144.1| 1883|Drosophila melanogaster LD46479p
protein.
Length = 1883
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 370 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 408
>AE014298-2429|AAF48628.3| 1905|Drosophila melanogaster CG4453-PA
protein.
Length = 1905
Score = 27.9 bits (59), Expect = 3.8
Identities = 10/39 (25%), Positives = 24/39 (61%)
Frame = +1
Query: 40 LIKMAKSKNHTNHNQNRKAHRNGIKKPRKTRHESTLAHG 156
L++++++ N+T++N N + N + + + R E + A G
Sbjct: 392 LLRISRTNNNTSNNNNNNNNNNNVIETKTRRSELSAAAG 430
>AE014296-847|AAF47899.1| 604|Drosophila melanogaster CG15020-PA
protein.
Length = 604
Score = 27.5 bits (58), Expect = 5.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 106 HFCELCGFGYDLYDSLTLPF 47
HF C +GYD + ++T PF
Sbjct: 313 HFKVTCEYGYDFWKTVTFPF 332
>BT016019-1|AAV36904.1| 1218|Drosophila melanogaster RE16243p
protein.
Length = 1218
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 55 KSKNHTNHNQNRKAHRNGIK-KPRKTRHESTLAH 153
++K H NH + + H+N K K RK +++S+ H
Sbjct: 100 ETKLHPNHRRRKNKHKNRNKNKRRKEQNQSSHEH 133
>AY051856-1|AAK93280.1| 874|Drosophila melanogaster LD35413p
protein.
Length = 874
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 55 KSKNHTNHNQNRKAHRNGIK-KPRKTRHESTLAHGS 159
+S +H + + RK HR + K R T H S+ A+ S
Sbjct: 829 RSHDHGSSSSGRKRHRTRSRSKSRSTHHSSSKAYSS 864
>AF200691-1|AAF23397.1| 1218|Drosophila melanogaster Dispatched
protein.
Length = 1218
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 55 KSKNHTNHNQNRKAHRNGIK-KPRKTRHESTLAH 153
++K H NH + + H+N K K RK +++S+ H
Sbjct: 100 ETKLHPNHRRRKNKHKNRNKNKRRKEQNQSSHEH 133
>AE014298-948|AAN09184.1| 3313|Drosophila melanogaster CG14438-PB,
isoform B protein.
Length = 3313
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 58 SKNHTNHNQNRKAHRNG 108
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
>AE014298-947|AAF46197.2| 3313|Drosophila melanogaster CG14438-PA,
isoform A protein.
Length = 3313
Score = 27.1 bits (57), Expect = 6.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1
Query: 58 SKNHTNHNQNRKAHRNG 108
SKN+ NHNQN+ NG
Sbjct: 544 SKNNNNHNQNQNVTANG 560
>AE014297-1406|AAF54719.2| 874|Drosophila melanogaster CG31211-PA,
isoform A protein.
Length = 874
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 55 KSKNHTNHNQNRKAHRNGIK-KPRKTRHESTLAHGS 159
+S +H + + RK HR + K R T H S+ A+ S
Sbjct: 829 RSHDHGSSSSGRKRHRTRSRSKSRSTHHSSSKAYSS 864
>AE014297-1405|AAO41546.1| 893|Drosophila melanogaster CG31211-PB,
isoform B protein.
Length = 893
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 55 KSKNHTNHNQNRKAHRNGIK-KPRKTRHESTLAHGS 159
+S +H + + RK HR + K R T H S+ A+ S
Sbjct: 848 RSHDHGSSSSGRKRHRTRSRSKSRSTHHSSSKAYSS 883
>AE014297-378|AAF51938.1| 1218|Drosophila melanogaster CG2019-PA
protein.
Length = 1218
Score = 27.1 bits (57), Expect = 6.7
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 55 KSKNHTNHNQNRKAHRNGIK-KPRKTRHESTLAH 153
++K H NH + + H+N K K RK +++S+ H
Sbjct: 100 ETKLHPNHRRRKNKHKNRNKNKRRKEQNQSSHEH 133
>BT001321-1|AAN71076.1| 1023|Drosophila melanogaster AT15860p
protein.
Length = 1023
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 79 NQNRKAHRNGIKKPRKTRHESTLAHGSK 162
N+ RK + IK +K RHEST HG K
Sbjct: 312 NKCRKPEK-AIKIQQKKRHESTKDHGQK 338
>AY089344-1|AAL90082.1| 922|Drosophila melanogaster AT16542p
protein.
Length = 922
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 79 NQNRKAHRNGIKKPRKTRHESTLAHGSK 162
N+ RK + IK +K RHEST HG K
Sbjct: 211 NKCRKPEK-AIKIQQKKRHESTKDHGQK 237
>AE014296-2480|AAF49661.2| 922|Drosophila melanogaster CG13457-PA,
isoform A protein.
Length = 922
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 79 NQNRKAHRNGIKKPRKTRHESTLAHGSK 162
N+ RK + IK +K RHEST HG K
Sbjct: 211 NKCRKPEK-AIKIQQKKRHESTKDHGQK 237
>AE014296-2479|AAN11789.1| 1023|Drosophila melanogaster CG13457-PB,
isoform B protein.
Length = 1023
Score = 26.6 bits (56), Expect = 8.9
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 79 NQNRKAHRNGIKKPRKTRHESTLAHGSK 162
N+ RK + IK +K RHEST HG K
Sbjct: 312 NKCRKPEK-AIKIQQKKRHESTKDHGQK 338
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,335,436
Number of Sequences: 53049
Number of extensions: 202677
Number of successful extensions: 1105
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -