Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_A23
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.93 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.93 
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.93 
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.93 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    24   0.93 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.0  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    21   8.7  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.7  

>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 288 KPFSNEGKPLVVQFTVKHEQDID 356
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 288 KPFSNEGKPLVVQFTVKHEQDID 356
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 288 KPFSNEGKPLVVQFTVKHEQDID 356
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 288 KPFSNEGKPLVVQFTVKHEQDID 356
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +3

Query: 288 KPFSNEGKPLVVQFTVKHEQDID 356
           +P +NE +PL V+F +  +Q ID
Sbjct: 20  RPVANESEPLEVKFGLTLQQIID 42


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 144 FPTNHQETSPQRIH 103
           FP NH    P+++H
Sbjct: 41  FPLNHLNEEPEKLH 54


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 80  QQADNDQYNSFHFRFTVPPSSTKDRP 3
           Q   +D YNSFH  ++   S  +  P
Sbjct: 470 QTESSDNYNSFHQFYSSESSQNQVAP 495


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -2

Query: 80  QQADNDQYNSFHFRFTVPPSSTKDRP 3
           Q   +D YNSFH  ++   S  +  P
Sbjct: 418 QTESSDNYNSFHQFYSSESSQNQVAP 443


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = -2

Query: 149 IAFPRIIRKLLLKEYITIYRR*CQQADNDQYNSFHFRF 36
           I  P I+RK+L+K++     R     ++    +FH  F
Sbjct: 79  IRSPEILRKVLVKDFDKFTNRNIATNESADPLAFHTLF 116


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 370 YPPPQSMSCSCLTVNWTTKGLP 305
           YPPP S+    ++V   T G P
Sbjct: 213 YPPPGSLGSMGVSVPCGTSGNP 234


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,212
Number of Sequences: 336
Number of extensions: 3517
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)