Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_A23
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 235 1e-62
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 235 1e-62
Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical pr... 87 8e-18
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 29 3.7
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 29 3.7
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 29 3.7
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 29 3.7
U58751-10|AAB00661.1| 205|Caenorhabditis elegans Hypothetical p... 28 4.9
U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical pr... 28 4.9
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 28 4.9
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 28 4.9
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 235 bits (576), Expect = 1e-62
Identities = 106/185 (57%), Positives = 136/185 (73%), Gaps = 1/185 (0%)
Frame = +3
Query: 93 INCDVFFEEKFPDDSWESNWVYSEHPXKEFGKFKLTAGKFFXDPXDDKGLKTSEDARFYA 272
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 273 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLXVFDCKLEXKDMHGETPYEIMFGPD 449
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+ V + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 450 ICGPGTKKVHVIFSYXGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNXKVESGD 629
ICGP T++VHVI +Y G+N LIKK+I CK D THLYTLI+ DNTYEV ID ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 630 LXADW 644
L DW
Sbjct: 191 LEEDW 195
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 235 bits (576), Expect = 1e-62
Identities = 106/185 (57%), Positives = 136/185 (73%), Gaps = 1/185 (0%)
Frame = +3
Query: 93 INCDVFFEEKFPDDSWESNWVYSEHPXKEFGKFKLTAGKFFXDPXDDKGLKTSEDARFYA 272
++ +V+F+E+F D SWE WV S+H +FG FKL+AGKFF D+G++TS+DA+FY+
Sbjct: 13 VSAEVYFKEEFNDASWEKRWVQSKHKD-DFGAFKLSAGKFFDVESRDQGIQTSQDAKFYS 71
Query: 273 LSRKF-KPFSNEGKPLVVQFTVKHEQDIDCGGGYLXVFDCKLEXKDMHGETPYEIMFGPD 449
+ KF K FSN+GK LV+Q+TVKHEQ IDCGGGY+ V + D HGETPY +MFGPD
Sbjct: 72 RAAKFDKDFSNKGKTLVIQYTVKHEQGIDCGGGYVKVMRADADLGDFHGETPYNVMFGPD 131
Query: 450 ICGPGTKKVHVIFSYXGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNXKVESGD 629
ICGP T++VHVI +Y G+N LIKK+I CK D THLYTLI+ DNTYEV ID ++G
Sbjct: 132 ICGP-TRRVHVILNYKGENKLIKKEITCKSDELTHLYTLILNSDNTYEVKIDGESAQTGS 190
Query: 630 LXADW 644
L DW
Sbjct: 191 LEEDW 195
>Z22181-5|CAA80183.1| 619|Caenorhabditis elegans Hypothetical
protein ZK632.6 protein.
Length = 619
Score = 87.4 bits (207), Expect = 8e-18
Identities = 52/150 (34%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Frame = +3
Query: 231 DKGLKTSEDARFYALSRKFK-PFSNEGKPLVVQFTVKHEQDIDCGGGYLXVFD--CKLEX 401
D GL AR +A++ K PF+ + VVQ+ +K E+ +CGGGYL + + +
Sbjct: 109 DLGLIVKTKARHHAIAAKLNTPFAFDANTFVVQYDIKFEEGQECGGGYLKLLSEGAEKDL 168
Query: 402 KDMHGETPYEIMFGPDICGPGTKKVHVIFSYXGKNHLIKKDIRCK----------DDVYT 551
+ +T Y IMFGPD CG T KVH+IF Y + + DD T
Sbjct: 169 ANFQDKTAYTIMFGPDKCG-ATGKVHLIFRYKNPINGTISEYHANQPTTIGSTYWDDHNT 227
Query: 552 HLYTLIVKPDNTYEVLIDNXKVESGDLXAD 641
HL+TL+VKP Y V +D + G++ +D
Sbjct: 228 HLFTLVVKPTGEYSVSVDGKSLYYGNMMSD 257
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = -3
Query: 223 GSXKNFPAVNLNFPNSFXGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFI 44
GS K PAV N NS+ Q+ HE ++ T +N T T +
Sbjct: 256 GSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQHYS 315
Query: 43 FDSQYHLLQQKTG 5
DS + Q G
Sbjct: 316 SDSNSNSNQSPPG 328
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = -3
Query: 223 GSXKNFPAVNLNFPNSFXGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFI 44
GS K PAV N NS+ Q+ HE ++ T +N T T +
Sbjct: 323 GSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQHYS 382
Query: 43 FDSQYHLLQQKTG 5
DS + Q G
Sbjct: 383 SDSNSNSNQSPPG 395
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = -3
Query: 223 GSXKNFPAVNLNFPNSFXGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFI 44
GS K PAV N NS+ Q+ HE ++ T +N T T +
Sbjct: 323 GSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQHYS 382
Query: 43 FDSQYHLLQQKTG 5
DS + Q G
Sbjct: 383 SDSNSNSNQSPPG 395
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/73 (27%), Positives = 27/73 (36%)
Frame = -3
Query: 223 GSXKNFPAVNLNFPNSFXGCSLYTQLLSHESSGNFSSKNTSQFIEDNASKLTTTSTTAFI 44
GS K PAV N NS+ Q+ HE ++ T +N T T +
Sbjct: 323 GSPKRQPAVQQNGSNSYDSQQQQPQMNQHEMQNSYWGVATPSLGVNNRGTPTPTQQQHYS 382
Query: 43 FDSQYHLLQQKTG 5
DS + Q G
Sbjct: 383 SDSNSNSNQSPPG 395
>U58751-10|AAB00661.1| 205|Caenorhabditis elegans Hypothetical
protein C07G1.7 protein.
Length = 205
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 380 DXEVSASTVNVLFMFDSELDYQGFTLITERFELTGESIEPR 258
D E + +L D ++DY+ F + E+F G+S+ R
Sbjct: 130 DRETCEENIKILQREDRDVDYREFLTMAEKFNEEGQSLWAR 170
>U23522-2|AAC46818.1| 521|Caenorhabditis elegans Hypothetical
protein W06B4.2 protein.
Length = 521
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -2
Query: 548 VDIIFAADIFFDEMVLTXVTEDYVYLLGSRTTNVRAEHNLIW 423
+D+I A+D+FFD + + + LL ++ EH IW
Sbjct: 111 LDVIIASDVFFDPSTFCPLIDTFAQLL------IKFEHATIW 146
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical protein
K07E12.1a protein.
Length = 13100
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 501 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNXKVESGDLXA 638
K I+K++ C+D THL L D+TY V ++ N +V++ A
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDNSTALA 12900
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin protein.
Length = 13100
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 501 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEV-LIDNXKVESGDLXA 638
K I+K++ C+D THL L D+TY V ++ N +V++ A
Sbjct: 12856 KEKWIRKEVTCRDSFGTHLNEL--PSDHTYTVCVMTNERVDNSTALA 12900
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,703,934
Number of Sequences: 27780
Number of extensions: 317166
Number of successful extensions: 896
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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