Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_A20
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical pr... 176 1e-44
U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical pr... 176 1e-44
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 31 0.71
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 31 0.71
AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical ... 29 2.2
Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81487-7|CAB04001.2| 495|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 28 6.7
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 28 6.7
AL021470-4|CAA16294.2| 495|Caenorhabditis elegans Hypothetical ... 28 6.7
>U64857-9|AAC25863.3| 302|Caenorhabditis elegans Hypothetical
protein C37C3.8a protein.
Length = 302
Score = 176 bits (428), Expect = 1e-44
Identities = 89/181 (49%), Positives = 113/181 (62%)
Frame = +2
Query: 113 RQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVS 292
R A HAG WY N +L RQL WL A G ARA+I+PH +QV
Sbjct: 11 RSASHAGSWYNANQRDLDRQLTKWLDNAGPRIGTARALISPHAGYSYCGETAAYAFKQVV 70
Query: 293 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEXTD 472
V+R+FILGPSH V + GCA+++ KY+TPL DL +D +I EL ATR FD MD +
Sbjct: 71 SSAVERVFILGPSHVVALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDE 130
Query: 473 ENEHSIEMHLPYIAKVMEEYKTSFTIIPILVXSLTPXKEAKYGAILAPYLADPQNLLVIS 652
E+EHSIEM LP+IAKVM + +TI+P+LV SL ++ YG I A Y+ DP+NL VIS
Sbjct: 131 ESEHSIEMQLPFIAKVMGSKR--YTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVIS 188
Query: 653 S 655
S
Sbjct: 189 S 189
>U64857-8|AAM29667.1| 350|Caenorhabditis elegans Hypothetical
protein C37C3.8b protein.
Length = 350
Score = 176 bits (428), Expect = 1e-44
Identities = 89/181 (49%), Positives = 113/181 (62%)
Frame = +2
Query: 113 RQAYHAGCWYTENGSELSRQLDLWLSKADLTHGPARAIIAPHXXXXXXXXXXXXXXRQVS 292
R A HAG WY N +L RQL WL A G ARA+I+PH +QV
Sbjct: 59 RSASHAGSWYNANQRDLDRQLTKWLDNAGPRIGTARALISPHAGYSYCGETAAYAFKQVV 118
Query: 293 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEXTD 472
V+R+FILGPSH V + GCA+++ KY+TPL DL +D +I EL ATR FD MD +
Sbjct: 119 SSAVERVFILGPSHVVALNGCAITTCSKYRTPLGDLIVDHKINEELRATRHFDLMDRRDE 178
Query: 473 ENEHSIEMHLPYIAKVMEEYKTSFTIIPILVXSLTPXKEAKYGAILAPYLADPQNLLVIS 652
E+EHSIEM LP+IAKVM + +TI+P+LV SL ++ YG I A Y+ DP+NL VIS
Sbjct: 179 ESEHSIEMQLPFIAKVMGSKR--YTIVPVLVGSLPGSRQQTYGNIFAHYMEDPRNLFVIS 236
Query: 653 S 655
S
Sbjct: 237 S 237
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +2
Query: 380 QTPLYDLTIDKQIYAELEATRQFDRMDEXTDENEHSIEMHLPYIAKVMEEYKTSFTIIP 556
QT + L ++ + A ++A R ++ T E E ++ + L + ++E+YK +FT++P
Sbjct: 514 QTVIRTLLFNQTVKAAVDAPRFHNQYLPETTETEEAMPLALREV--LVEQYKQNFTVVP 570
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +2
Query: 380 QTPLYDLTIDKQIYAELEATRQFDRMDEXTDENEHSIEMHLPYIAKVMEEYKTSFTIIP 556
QT + L ++ + A ++A R ++ T E E ++ + L + ++E+YK +FT++P
Sbjct: 544 QTVIRTLLFNQTVKAAVDAPRFHNQYLPETTETEEAMPLALREV--LVEQYKQNFTVVP 600
>AF039712-3|AAK21400.3| 393|Caenorhabditis elegans Hypothetical
protein F54D7.2 protein.
Length = 393
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/24 (58%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -2
Query: 192 FDSHKSSCRDSSLPFSVY-QHPAW 124
FDS+K +C D+S P SVY HP W
Sbjct: 24 FDSYKYNCVDNS-PLSVYVSHPFW 46
>Z73974-8|CAA98274.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 ALARRTHIDKSVLWLSNEFSYWAH-HTT*GSQDALFRPSTSTRLPFTISPSINKYT 422
+LA H + L + F W+ H T SQ A+ PS+ T LP TISP +K T
Sbjct: 148 SLAFCAHPIREYLEIKTIFPSWSMTHMTELSQ-AIGEPSSPTFLPITISPFGDKMT 202
>Z73905-7|CAA98112.2| 526|Caenorhabditis elegans Hypothetical
protein F29F11.2 protein.
Length = 526
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 258 ALARRTHIDKSVLWLSNEFSYWAH-HTT*GSQDALFRPSTSTRLPFTISPSINKYT 422
+LA H + L + F W+ H T SQ A+ PS+ T LP TISP +K T
Sbjct: 148 SLAFCAHPIREYLEIKTIFPSWSMTHMTELSQ-AIGEPSSPTFLPITISPFGDKMT 202
>Z92847-6|CAB07423.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 417 ICLSMVRS*RGVWYLSRDERAHPAILTWCDGPNMKIRLTTTGLTCLYAYAEQ 262
I LSM++ GVWY++ D A P + NMK ++ L +Y YA++
Sbjct: 411 ITLSMLQ---GVWYIAADLNADPKMFLQSTVINMKRIQNSSNLELIY-YAQK 458
>Z81487-7|CAB04001.2| 495|Caenorhabditis elegans Hypothetical
protein Y17D7A.4 protein.
Length = 495
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 389 LYDLTIDKQIYAELEATRQFDRMDEXTDENEHSIEMHLPYIAKVMEEYKTSFTIIPILVX 568
LY+ + ++I EL+ DR+ D+N+ LPY+ + E + + IIP+ +
Sbjct: 318 LYNPEVQRKIREELDKVIGNDRLISTADKND------LPYLQAFVTETQRTANIIPLNLI 371
Query: 569 SLT 577
+T
Sbjct: 372 HMT 374
>Z73911-9|CAA98143.1| 1076|Caenorhabditis elegans Hypothetical
protein T12A7.5 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = -2
Query: 417 ICLSMVRS*RGVWYLSRDERAHPAILTWCDGPNMKIRLTTTGLTCLYAYAEQ 262
I LSM++ GVWY++ D A P + NMK ++ L +Y YA++
Sbjct: 411 ITLSMLQ---GVWYIAADLNADPKMFLQSTVINMKRIQNSSNLELIY-YAQK 458
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 293 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEXTD 472
P+++ ++ + P R GC LSS D L D+ ++Q+Y A+ D TD
Sbjct: 395 PIMLAYVYGVVPLSLCRNGGCGLSSSDS-SLALADID-EEQLYGTPGASAPVDLSQFMTD 452
Query: 473 ENEHSIEMHL-PYIAKVMEEYKTSF 544
++ + + P I + E KT +
Sbjct: 453 ASKREDIVSIDPSILSMPREMKTRY 477
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 293 PVVVKRIFILGPSHHVRIAGCALSSLDKYQTPLYDLTIDKQIYAELEATRQFDRMDEXTD 472
P+++ ++ + P R GC LSS D L D+ ++Q+Y A+ D TD
Sbjct: 395 PIMLAYVYGVVPLSLCRNGGCGLSSSDS-SLALADID-EEQLYGTPGASAPVDLSQFMTD 452
Query: 473 ENEHSIEMHL-PYIAKVMEEYKTSF 544
++ + + P I + E KT +
Sbjct: 453 ASKREDIVSIDPSILSMPREMKTRY 477
>AL021470-4|CAA16294.2| 495|Caenorhabditis elegans Hypothetical
protein Y17D7A.4 protein.
Length = 495
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +2
Query: 389 LYDLTIDKQIYAELEATRQFDRMDEXTDENEHSIEMHLPYIAKVMEEYKTSFTIIPILVX 568
LY+ + ++I EL+ DR+ D+N+ LPY+ + E + + IIP+ +
Sbjct: 318 LYNPEVQRKIREELDKVIGNDRLISTADKND------LPYLQAFVTETQRTANIIPLNLI 371
Query: 569 SLT 577
+T
Sbjct: 372 HMT 374
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,223,317
Number of Sequences: 27780
Number of extensions: 322718
Number of successful extensions: 739
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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