Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_A19
         (438 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   2.2  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   3.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   3.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.9  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   5.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   5.1  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.8  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.0  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 151 AVTRLQQFLVTHREWWSALDAQRSFVN 231
           AVT +   L+ ++E WS+L+    F++
Sbjct: 31  AVTIILSSLIFNQEQWSSLNKNFQFID 57


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 197 GLRWMLNDPLSTH 235
           G R+++ND LS H
Sbjct: 134 GFRYLVNDELSAH 146


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 197 GLRWMLNDPLSTH 235
           G R+++ND LS H
Sbjct: 448 GFRYLVNDELSAH 460


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 307  RALFNFKIFFPTCIME*YFSSSLQWIHL 390
            RA F    FFP      + S  + W+HL
Sbjct: 968  RAGFTAAGFFPIDYTSAFSSEKIVWLHL 995


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = -2

Query: 371 ELEKYHSIIQVGKKILKLNRAL 306
           E+EKY++I+   + ++ LN A+
Sbjct: 325 EIEKYYNILYFCRIMVYLNSAI 346


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = -3

Query: 154 QPGHLTSMK*ELGCGTSRLSLCFLLSERRGRMQQINCERHGYSV 23
           QP HL S+  ++  G   L+   ++         + CE H   V
Sbjct: 590 QPKHLLSIARQVALGMEHLAKTRVVHRDLAARNVLVCENHTVKV 633


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 225 CQPTGGRAXLTEGCS 269
           C   GG A +  GCS
Sbjct: 335 CAAVGGSANIMSGCS 349


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +3

Query: 48  LICCILPLRSERRKHKLKRLVP 113
           LI  I  L   ++ H+L++LVP
Sbjct: 12  LISKIFALLPVKKHHRLEKLVP 33


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 151 PGHLTSMK*ELGCGTS 104
           PG L SM   + CGTS
Sbjct: 216 PGSLGSMGVSVPCGTS 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,053
Number of Sequences: 336
Number of extensions: 1758
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)