Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_A18
(651 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0677 - 19388888-19389019,19389124-19389216,19389317-193894... 175 3e-44
08_02_0211 - 14333553-14333684,14333795-14333887,14334019-143341... 169 2e-42
01_07_0018 - 40488702-40488833,40488928-40489020,40489125-404892... 150 1e-36
10_01_0125 + 1509642-1509759,1509847-1509950,1510693-1510824,151... 42 4e-04
03_02_0321 + 7443835-7443837,7443957-7444077,7444168-7444271,744... 41 0.001
06_01_1127 + 9294079-9294193,9294300-9294369,9294611-9294716,929... 37 0.016
02_05_0610 - 30342105-30342266,30343024-30343129,30343788-303438... 37 0.016
07_03_0785 - 21507938-21508447 32 0.34
06_03_0392 + 20318728-20319309,20319596-20319725,20319844-203198... 31 0.80
07_03_1414 - 26403361-26403969 31 1.1
07_03_1422 + 26462871-26463434,26463772-26463897 29 2.4
07_03_1413 - 26396426-26396890 29 2.4
01_01_1202 - 9681836-9683146 29 3.2
04_04_1159 - 31352922-31353098,31354117-31354267,31354581-313548... 29 4.2
02_04_0587 + 24110333-24110584,24111193-24111261,24112347-241128... 29 4.2
02_02_0061 + 6468190-6471046,6471318-6471736 28 7.4
10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314 27 9.8
07_01_0875 - 7265529-7265588,7265681-7265746,7266008-7266293,726... 27 9.8
07_01_0360 + 2646279-2646283,2647113-2647398,2648043-2648108,264... 27 9.8
>09_04_0677 -
19388888-19389019,19389124-19389216,19389317-19389445,
19389559-19389728,19390280-19390481,19390576-19390623,
19390797-19390799
Length = 258
Score = 175 bits (426), Expect = 3e-44
Identities = 85/155 (54%), Positives = 104/155 (67%)
Frame = +2
Query: 185 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 364
+ NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+T
Sbjct: 20 VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRT 79
Query: 365 LDKTTAKGLFKILXKYRPETEXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 544
LDK A LFK+L KYRPE + +P ++ G N VT L
Sbjct: 80 LDKNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYL 138
Query: 545 VXXXKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 649
+ KAQLVVIAHDVDPIELV++LPALCRKM VPY
Sbjct: 139 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEVPY 173
>08_02_0211 -
14333553-14333684,14333795-14333887,14334019-14334105,
14334220-14334389,14334985-14335186,14335604-14335606
Length = 228
Score = 169 bits (411), Expect = 2e-42
Identities = 82/153 (53%), Positives = 102/153 (66%)
Frame = +2
Query: 185 IVNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQT 364
+ NPLFEKRPK F IG + P +DL RFV+WPK +RIQRQ+ +L++RLKVPP +NQFT+T
Sbjct: 4 VTNPLFEKRPKQFGIGGALPPKKDLHRFVKWPKVVRIQRQRRILKQRLKVPPALNQFTRT 63
Query: 365 LDKTTAKGLFKILXKYRPETEXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 544
LDK A LFK+L KYRPE + +P ++ G N VT L
Sbjct: 64 LDKNLATNLFKMLLKYRPE-DKAAKKERLLKRAQAEAEGKTVEAKKPIVVKYGLNHVTYL 122
Query: 545 VXXXKAQLVVIAHDVDPIELVLFLPALCRKMGV 643
+ KAQLVVIAHDVDPIELV++LPALCRKM +
Sbjct: 123 IEQSKAQLVVIAHDVDPIELVVWLPALCRKMEI 155
>01_07_0018 -
40488702-40488833,40488928-40489020,40489125-40489253,
40489379-40489500,40490292-40490544,40490636-40490638
Length = 243
Score = 150 bits (363), Expect = 1e-36
Identities = 79/154 (51%), Positives = 99/154 (64%)
Frame = +2
Query: 188 VNPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVLQRRLKVPPPINQFTQTL 367
VNPLFEKRPK F IG + P +DL RFVRWPK +RIQRQ+ VL++RLKVPP +NQFT+TL
Sbjct: 22 VNPLFEKRPKQFGIGGALPPRKDLHRFVRWPKAVRIQRQRRVLKQRLKVPPALNQFTRTL 81
Query: 368 DKTTAKGLFKILXKYRPETEXXXXXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKLV 547
DK ++L + + E E +P ++ G + VT L+
Sbjct: 82 DKNLGCQKERLLKRAQAEAE-----------------GKTVEAKKPIVVKYGLDHVTYLI 124
Query: 548 XXXKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 649
KAQLVVIAHDVDPIELV++LPALCRKM +PY
Sbjct: 125 EQSKAQLVVIAHDVDPIELVVWLPALCRKMEIPY 158
>10_01_0125 +
1509642-1509759,1509847-1509950,1510693-1510824,
1510936-1510962
Length = 126
Score = 41.9 bits (94), Expect = 4e-04
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +2
Query: 512 IRSGTNTVTKLVXXXKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 649
++ G N TK + A+ VV+A D +P+E++L LP L VPY
Sbjct: 33 LKKGANEATKTLNRGIAEFVVMAADAEPLEILLHLPLLAEDKNVPY 78
>03_02_0321 +
7443835-7443837,7443957-7444077,7444168-7444271,
7445056-7445187,7445285-7445311
Length = 128
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +2
Query: 512 IRSGTNTVTKLVXXXKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 649
++ G N TK + ++ VV+A D +P+E++L LP L VPY
Sbjct: 35 LKKGANEATKTLNRGISEFVVMAADTEPLEILLHLPLLAEDKNVPY 80
>06_01_1127 +
9294079-9294193,9294300-9294369,9294611-9294716,
9295665-9295805,9296377-9296475
Length = 176
Score = 36.7 bits (81), Expect = 0.016
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +2
Query: 512 IRSGTNTVTKLVXXXKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 649
++ G V K + + L +IA ++ PI+++ +P LC + +PY
Sbjct: 45 LKRGVKEVVKSIRRGQKGLCIIAGNISPIDVITHVPILCEEANIPY 90
>02_05_0610 -
30342105-30342266,30343024-30343129,30343788-30343857,
30343978-30344092
Length = 150
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/46 (30%), Positives = 25/46 (54%)
Frame = +2
Query: 512 IRSGTNTVTKLVXXXKAQLVVIAHDVDPIELVLFLPALCRKMGVPY 649
++ G V K + L VIA ++ PI+++ +P LC + +PY
Sbjct: 45 LKRGVKEVVKSIRRGNKGLCVIAGNISPIDVITHVPILCEEANIPY 90
>07_03_0785 - 21507938-21508447
Length = 169
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 486 SLHQRGPTPSDPAQTQSPSWSXXXRRSLWSSLMMLIPLSWFSSC 617
+LH RGP +DP + S + + + ++LM+L P++ SSC
Sbjct: 35 NLHARGPKTADPPASSSAAVDLDSQGPMVANLMLLRPVTADSSC 78
>06_03_0392 +
20318728-20319309,20319596-20319725,20319844-20319895,
20319995-20320061,20320547-20320633,20322526-20322567,
20322635-20322740,20323155-20323219,20323299-20323343,
20323442-20323549,20323636-20323723,20324147-20324193,
20324355-20324363
Length = 475
Score = 31.1 bits (67), Expect = 0.80
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 289 PHPAPEGCTSASSESAPSDQP 351
P PAPE +A+ E+APSD P
Sbjct: 53 PQPAPEEAPAAAEEAAPSDDP 73
>07_03_1414 - 26403361-26403969
Length = 202
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -3
Query: 301 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 161
AL A + P + G++ + + +T G+ L P LEE + GL L+D
Sbjct: 76 ALSAAVSNPGFFFGRMVVFNDPVTEGRALPPSLEETVVRAQGLYLYD 122
>07_03_1422 + 26462871-26463434,26463772-26463897
Length = 229
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 301 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 161
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 74 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 120
>07_03_1413 - 26396426-26396890
Length = 154
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = -3
Query: 301 ALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEERIHDLLGLNLFD 161
AL + P Y G+V + + +T G+ L P LEE GL L D
Sbjct: 28 ALSTAVSSPGYFFGRVVVFNDPMTEGRALPPSLEETAVRAQGLYLLD 74
>01_01_1202 - 9681836-9683146
Length = 436
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 148 RPIGGQKG*AQEDRESSLREEAKELCHWSGHSANSGLVQICKMAQVYPHPAPEGCTSASS 327
R +GG + RE +L EA SGHS+N G + Q+ H E S+
Sbjct: 262 RDVGGSRS---SIRERNLEREAPMAVSVSGHSSNQGGSSQHAVIQIEQHEEGETVPLVSA 318
Query: 328 ESAPSDQP 351
SA + P
Sbjct: 319 ASANNAAP 326
>04_04_1159 -
31352922-31353098,31354117-31354267,31354581-31354812,
31354902-31355112,31355791-31355909,31355994-31356176,
31356283-31356481,31356636-31357015,31357127-31357191,
31357925-31357990,31358427-31358501,31358781-31358852,
31359318-31359386,31359476-31359547,31359658-31359729,
31360126-31360230,31360282-31360353,31361053-31361230,
31361707-31361791
Length = 860
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = -3
Query: 310 SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPL---LEERIHDLLG-LNLFDHQWGGG 143
SL L+ + + SG++PS L+ LT K+LW +I D +G NL D ++ G
Sbjct: 164 SLFKLEELFIDSAGLSGELPSSLSKLTRMKILWASDNNFTGQIPDYIGSWNLTDLRFQGN 223
Query: 142 YF 137
F
Sbjct: 224 SF 225
>02_04_0587 +
24110333-24110584,24111193-24111261,24112347-24112850,
24113094-24113336
Length = 355
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 236 PDQWQSSLASSRREDSRSSWAQPF*PPMGRRL 141
P SSLA +RR +R AQP PP RR+
Sbjct: 24 PSSAASSLAFARRAAARPLRAQPLLPPAARRV 55
>02_02_0061 + 6468190-6471046,6471318-6471736
Length = 1091
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -3
Query: 310 SLLALDADILGPSYKSGQVPSWLNALTNGKVLWPLLEE 197
SL L A +LG + +G +PS++ +L N K L +LEE
Sbjct: 111 SLQNLQALVLGENRLTGSIPSFIGSLANLKFL--ILEE 146
>10_05_0113 + 9280756-9283489,9283726-9284048,9284201-9284314
Length = 1056
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 310 SLLALDADILGPSYKSGQVPSWLNALT 230
+L AL + +Y GQ+PSWL LT
Sbjct: 179 NLTALTMFSIADNYVHGQIPSWLGNLT 205
>07_01_0875 -
7265529-7265588,7265681-7265746,7266008-7266293,
7267138-7267142
Length = 138
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 521 GTNTVTKLVXXXKAQLVVIAHDVDPIELVLFLPALCRKMGV 643
G K + AQL V+A D D + V + ALC + V
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNV 81
>07_01_0360 +
2646279-2646283,2647113-2647398,2648043-2648108,
2648199-2648258
Length = 138
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +2
Query: 521 GTNTVTKLVXXXKAQLVVIAHDVDPIELVLFLPALCRKMGV 643
G K + AQL V+A D D + V + ALC + V
Sbjct: 41 GLREAAKAIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNV 81
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,159,162
Number of Sequences: 37544
Number of extensions: 340362
Number of successful extensions: 1168
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -