Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_A15
         (652 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    29   0.17 
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   1.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.7  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   2.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   6.3  
AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione S-tran...    23   6.3  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 28.7 bits (61), Expect = 0.17
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +1

Query: 403  GERRQSRRASTEANEQGNIDDVRAKEMEALRRXARADEHAEWERDVRAKXTGVSI-PATP 579
            G  R+SR A +EA+       +R +EME LRR AR     +  R+V +     +I  AT 
Sbjct: 1162 GRNRRSRSAPSEADTIRR--RMRRREMERLRRTARRVPSNQGVREVLSADALAAITEATT 1219

Query: 580  RGR 588
             GR
Sbjct: 1220 SGR 1222



 Score = 25.8 bits (54), Expect = 1.2
 Identities = 19/65 (29%), Positives = 28/65 (43%)
 Frame = +1

Query: 403  GERRQSRRASTEANEQGNIDDVRAKEMEALRRXARADEHAEWERDVRAKXTGVSIPATPR 582
            G  R++RR    A E+     V  +   A+    R  E +     VRA+  G + P  P 
Sbjct: 1067 GRARRTRRGRRRAEER-----VEVRLASAMAAAEREREDSILMAAVRAEEAGEAPPPIPM 1121

Query: 583  GRRGI 597
             RRG+
Sbjct: 1122 RRRGL 1126


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 445 EQGNIDDVRAKEMEALRRXARADEHAEWERDVRAKXTGV 561
           E GN+  +   E   +R      E A+ ERD+R + TG+
Sbjct: 338 EAGNVKSLGQMETVEIRFIDEETEAADVERDLRNQITGL 376


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 639 ARIRLRSASVTNGSDAPPPS 580
           +R+R RSA  TN S  PPP+
Sbjct: 660 SRLRNRSARNTNHSIVPPPN 679


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
 Frame = +1

Query: 568 PATP--RGRRGIRSVSDGSTPKSNASIPG 648
           P  P  RG  GI  +   S PK +A +PG
Sbjct: 319 PGVPGLRGNDGIPGLEGPSGPKGDAGVPG 347


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = -1

Query: 622  ECFRH*RIGCPASLWAWQVSIHPXLSH-ARP 533
            EC RH      + +WA+ ++I   L++ ARP
Sbjct: 1006 ECIRHRVFTSKSDVWAFGITIWELLTYGARP 1036



 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -1

Query: 64  TALRNEGICWRSRCSACGCW 5
           T    EG+    +CS  GCW
Sbjct: 463 TECHEEGMECSEQCSKAGCW 482


>AF071160-3|AAC79993.1|  209|Anopheles gambiae glutathione
           S-transferase protein.
          Length = 209

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +1

Query: 196 PTIETYQPASSINISTKKDAVKSVKSYKDNVK 291
           P I   QPA+  N    KDAV  + S+ D  K
Sbjct: 114 PQIFAKQPANPENEQKMKDAVGFLNSFLDGHK 145


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.307    0.122    0.339 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,631
Number of Sequences: 2352
Number of extensions: 12938
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)