Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_A10
(653 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 153 3e-38
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 103 3e-23
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 90 2e-19
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 89 7e-19
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 82 8e-17
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 81 1e-16
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 64 2e-11
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 61 1e-10
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 44 2e-05
SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|... 28 1.0
SPAC959.03c |||U3 snoRNP-associated protein Utp7|Schizosaccharom... 26 4.1
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 7.2
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 25 7.2
SPAC1782.04 |cox24||mitochondrial mRNA processing protein Cox24 ... 25 9.5
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|... 25 9.5
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 153 bits (370), Expect = 3e-38
Identities = 67/99 (67%), Positives = 87/99 (87%)
Frame = +2
Query: 143 DEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVT 322
D+ G PFI++RDQ++++RL G DA+KSHI A + +A+ +RTSLGPRGLDK+++S DG++T
Sbjct: 12 DDQGNPFILVRDQEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEIT 71
Query: 323 VTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTG 439
VTNDGATIL M+VEHQI KLLVQL++SQDDEIGDGTTG
Sbjct: 72 VTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTG 110
Score = 90.6 bits (215), Expect = 2e-19
Identities = 44/71 (61%), Positives = 53/71 (74%)
Frame = +3
Query: 438 GVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIK 617
GVVVLAGALLEQA L+DKGIHPIRIADGYE A +A+ HLD++S+ + NL +
Sbjct: 110 GVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFR 169
Query: 618 VAMTTLGSKVV 650
A T+LGSKVV
Sbjct: 170 SAKTSLGSKVV 180
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 103 bits (246), Expect = 3e-23
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = +2
Query: 191 KRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEH 370
++++G D ++ A IA+ +++SLGP GLDK++V GDVTVTNDGATIL ++DVEH
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 371 QIGKLLVQLAQSQDDEIGDGTT 436
GK+LV+LAQ QD E+GDGTT
Sbjct: 75 PAGKVLVELAQQQDKEVGDGTT 96
Score = 45.2 bits (102), Expect = 8e-06
Identities = 25/70 (35%), Positives = 39/70 (55%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
VV++A LL +A+ L+ IHP I GY +A A+ + V V+ E+LI V
Sbjct: 98 VVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSC-SVDSLGKESLINV 156
Query: 621 AMTTLGSKVV 650
A T++ SK++
Sbjct: 157 AKTSMSSKII 166
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 90.2 bits (214), Expect = 2e-19
Identities = 42/93 (45%), Positives = 62/93 (66%)
Frame = +2
Query: 158 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 337
P I+L++ + G + S+I A + T+RT+LGP G DKLMV G+V ++NDG
Sbjct: 9 PVIVLKEGTDDSQ--GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 338 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTT 436
ATI+K++D+ H K LV +A++QD E+GDGTT
Sbjct: 67 ATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTT 99
Score = 36.3 bits (80), Expect = 0.004
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNK--NTXENLI 614
VVV AG LL +A ++ G+ I GY AA LA+ + ++ ++ + L
Sbjct: 101 VVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLT 160
Query: 615 KVAMTTLGSKVV 650
K A T + SK++
Sbjct: 161 KCASTAMNSKLI 172
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 88.6 bits (210), Expect = 7e-19
Identities = 44/86 (51%), Positives = 60/86 (69%)
Frame = +2
Query: 179 QDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMM 358
QDR+K + S+I AAR +A +RTSLGP+G+DK++ + G+V +TNDGATILK +
Sbjct: 12 QDREKP---QEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHL 68
Query: 359 DVEHQIGKLLVQLAQSQDDEIGDGTT 436
V H K+LV L+ +QD E GDGTT
Sbjct: 69 SVLHPAAKMLVDLSAAQDVEAGDGTT 94
Score = 52.0 bits (119), Expect = 7e-08
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSE-AFPVNKNTXENLIK 617
VV+LAG++L A LL KGIHP IA+ ++ AA +D + E A + + E+L++
Sbjct: 96 VVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFT---VDCMKENALAIELSDRESLLR 152
Query: 618 VAMTTLGSKVV 650
A T+L SK+V
Sbjct: 153 AATTSLNSKIV 163
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 81.8 bits (193), Expect = 8e-17
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +2
Query: 194 RLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQ 373
R G A S+IQAA+ +A +RT LGPR + K+++ G V +TNDG IL+ ++V H
Sbjct: 14 RQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHP 73
Query: 374 IGKLLVQLAQSQDDEIGDGTT 436
K +++LA++QD+E+GDGTT
Sbjct: 74 AAKSMIELARTQDEEVGDGTT 94
Score = 48.4 bits (110), Expect = 9e-07
Identities = 24/70 (34%), Positives = 43/70 (61%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
V++LAG +L AS LLD+ IHP+ + ++ A AL+ +D ++ PVN + + ++
Sbjct: 96 VIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDEIT--LPVNVDDNAEMFRL 153
Query: 621 AMTTLGSKVV 650
T +G+K+V
Sbjct: 154 IRTCIGTKLV 163
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 81.4 bits (192), Expect = 1e-16
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +2
Query: 158 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVS-SDGDVTVTND 334
P I + Q+R G +A S A + ++++LGP+G+DK++ S S GD+ VTND
Sbjct: 5 PHQIFNESGIQER--GENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTND 62
Query: 335 GATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTGRC 445
GATILK + +++ K+LV +++ QDDE+GDGTT C
Sbjct: 63 GATILKSIALDNAAAKVLVNISKVQDDEVGDGTTSVC 99
Score = 38.3 bits (85), Expect = 0.001
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Frame = +3
Query: 387 LCNWLKVKMTKLVMVPQGVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHL-- 560
L N KV+ ++ V V A LL QA +++ IHP I DGY +A A+ L
Sbjct: 80 LVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALRA 139
Query: 561 DSVSEAFPVNKNTXENLIKVAMTTLGSKVV 650
S+ + K +L +A TTL SK++
Sbjct: 140 SSIDNSSDPAK-FRSDLENIARTTLSSKIL 168
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 64.1 bits (149), Expect = 2e-11
Identities = 29/73 (39%), Positives = 47/73 (64%)
Frame = +2
Query: 209 DAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 388
DA+ + A R+++ RTSLGP G +K++V+ +TND ATI++ ++V H KL+
Sbjct: 26 DAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATIIRELEVIHPAAKLV 85
Query: 389 VQLAQSQDDEIGD 427
V Q Q++E+GD
Sbjct: 86 VDATQQQENELGD 98
Score = 45.2 bits (102), Expect = 8e-06
Identities = 24/68 (35%), Positives = 36/68 (52%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
VVV G LL +A N++ G+ P+ IA GYEMA + + L+ + + + LIK
Sbjct: 103 VVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEEICADKIETVESEKELIKA 162
Query: 621 AMTTLGSK 644
T + SK
Sbjct: 163 IRTCISSK 170
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 61.3 bits (142), Expect = 1e-10
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +2
Query: 212 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLV 391
A++ +I AA + L+++LGP G K++V G + +T DG +L M +++ +
Sbjct: 17 ALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLTEMQIQNPTASCIA 76
Query: 392 QLAQSQDDEIGDGTTGRC 445
+ A +QDD GDGTT C
Sbjct: 77 KAATAQDDATGDGTTSVC 94
Score = 54.4 bits (125), Expect = 1e-08
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
V +L G LL+QA + +G+HP I+DG+ +A ALT LDS F V++ N+ K
Sbjct: 93 VCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFLDSFKTDFEVDREVLLNVAKT 152
Query: 621 AMTT-LGSKVV 650
+++T + SKVV
Sbjct: 153 SLSTKISSKVV 163
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 44.0 bits (99), Expect = 2e-05
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Frame = +2
Query: 203 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATI---LKMMDVEHQ 373
G DA S + +A + +LGP+G + L+ G +T DG T+ + + D
Sbjct: 40 GVDARASLLTGVDTLARAVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSLKDKFEN 99
Query: 374 IGKLLVQLAQSQDDEI-GDGTT 436
+G LVQ S+ +E+ GDGTT
Sbjct: 100 LGARLVQDVASKTNEVAGDGTT 121
>SPBC30D10.03c |||IMP 5'-nucleotidase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 405
Score = 28.3 bits (60), Expect = 1.0
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +2
Query: 269 LGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLL 388
L GLD MVS DGDVT+ DG +L V ++ +LL
Sbjct: 136 LADNGLD--MVSFDGDVTLYEDGQPLLPDNPVISRLIQLL 173
>SPAC959.03c |||U3 snoRNP-associated protein
Utp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 520
Score = 26.2 bits (55), Expect = 4.1
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 262 AKSACNLSGCLYM*LYGIGTGKSFLSVLVP 173
+ S +L C Y + GIG K F S++VP
Sbjct: 350 SSSVVDLHYCPYEDILGIGHAKGFESIIVP 379
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 415 RNW*WYHRALLFLLVHSLSKPQICWTKVSIPFV*LTVMRWLPPWH 549
+NW W+ +A + LL SL + + WT P V +VM WH
Sbjct: 73 QNWGWWKKAYIVLLSTSL-QMYVFWTPNFYPGVQDSVMEL---WH 113
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 25.4 bits (53), Expect = 7.2
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +3
Query: 591 KNTXENLIKVAMTTLGS 641
+NT N++KV +TTLG+
Sbjct: 1008 RNTIRNIVKVFLTTLGA 1024
>SPAC1782.04 |cox24||mitochondrial mRNA processing protein Cox24
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 175
Score = 25.0 bits (52), Expect = 9.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -3
Query: 57 CSPQVQNKTQILQSQ 13
C P+V++KTQ+ QSQ
Sbjct: 72 CVPKVESKTQVSQSQ 86
>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 9.5
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Frame = -3
Query: 369 CSTSIIFRIVAPSFVTVTSPSDD--TISLSRP-RGPR--DVRRVLAICRAACICDFMASV 205
CST++ + I P TV S+D T S+S GP D V AI +C+F++
Sbjct: 252 CSTNVDYTIPEPILKTVKFSSEDEYTGSVSLAWNGPSALDAYTVFAI---ETLCEFLSES 308
Query: 204 PVSLF 190
VS F
Sbjct: 309 AVSPF 313
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,719,237
Number of Sequences: 5004
Number of extensions: 55053
Number of successful extensions: 163
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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