Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_A10
(653 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0477 - 21250811-21250981,21251261-21251374,21251447-212516... 145 2e-35
06_03_1193 - 28298656-28298754,28299303-28299377,28299456-282995... 91 5e-19
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 90 1e-18
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 87 1e-17
02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949 79 2e-15
03_05_0339 + 23287620-23287676,23287784-23287849,23287937-232880... 76 2e-14
05_07_0067 + 27463703-27463705,27464309-27464365,27464779-274648... 75 7e-14
03_06_0362 + 33379489-33379624,33380161-33380423,33380524-333806... 75 7e-14
10_08_0620 - 19321612-19323237 71 6e-13
04_04_0729 + 27612106-27612195,27612284-27612370,27612469-276125... 70 1e-12
05_01_0337 - 2658647-2658722,2658797-2658915,2658995-2659102,265... 69 2e-12
02_01_0024 + 159595-159801,159892-160017,160201-160338,160431-16... 48 9e-06
03_01_0305 - 2383187-2383298,2383606-2383684,2383762-2383867,238... 47 1e-05
06_01_0097 - 810283-810296,810398-810521,810974-811066,811144-81... 46 3e-05
05_06_0240 - 26629218-26629323,26629412-26629490,26629656-266297... 44 1e-04
09_06_0292 + 22075647-22075691,22077394-22077507,22077602-220778... 30 1.9
11_06_0065 - 19736265-19737302 29 3.2
07_03_1016 - 23313210-23313827,23314649-23314717 28 5.6
07_03_1288 + 25518522-25518797 28 7.5
03_04_0205 - 18485933-18488446 28 7.5
06_03_1277 + 28918140-28918279,28919552-28919761,28920179-289203... 27 9.9
05_04_0120 - 18175292-18176206,18177315-18177785,18178562-18179635 27 9.9
04_04_1272 - 32288142-32288456,32288538-32288670,32288780-322890... 27 9.9
>06_03_0477 -
21250811-21250981,21251261-21251374,21251447-21251613,
21252051-21252153,21252315-21252367,21252438-21252570,
21252835-21253183,21253685-21254003,21254519-21254717
Length = 535
Score = 145 bits (352), Expect = 2e-35
Identities = 66/103 (64%), Positives = 88/103 (85%)
Frame = +2
Query: 131 SVAFDEYGRPFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSD 310
++AFDE+GRPFIILR+Q+++ RL G DA K++I A + +A LRTSLGP+G+DK++ S D
Sbjct: 2 ALAFDEFGRPFIILREQEKKSRLRGLDAQKANIAAGKAVARILRTSLGPKGMDKMLQSPD 61
Query: 311 GDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTTG 439
GDVT+TNDGATIL+ MDV++QI KL+V+L+ SQD EIGDGTTG
Sbjct: 62 GDVTITNDGATILEQMDVDNQIAKLMVELSCSQDYEIGDGTTG 104
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = +3
Query: 438 GVVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIK 617
GVVV+AG+LLEQA LL++GIHPIRIA+GYE+A+ +A HL+ +S F + E L++
Sbjct: 104 GVVVMAGSLLEQAEKLLERGIHPIRIAEGYELASRIAFDHLEHISHKFEFSATNIEPLVQ 163
Query: 618 VAMTTLGSKVV 650
MTTL SK+V
Sbjct: 164 TCMTTLSSKIV 174
>06_03_1193 -
28298656-28298754,28299303-28299377,28299456-28299544,
28299679-28299760,28300385-28300474,28300557-28300655,
28300733-28300852,28300968-28301084,28301174-28301309,
28301415-28301584,28301744-28301947,28302032-28302157,
28302841-28303101,28303215-28303229
Length = 560
Score = 91.5 bits (217), Expect = 5e-19
Identities = 39/78 (50%), Positives = 57/78 (73%)
Frame = +2
Query: 203 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGK 382
G + S+I A +A T+RT+LGPRG+DKL+ G T++NDGATI++++D+ H K
Sbjct: 21 GRAQVVSNINACTVVADTVRTTLGPRGMDKLIHDDKGGTTISNDGATIMRLLDIIHPAAK 80
Query: 383 LLVQLAQSQDDEIGDGTT 436
+LV +A+SQD E+GDGTT
Sbjct: 81 ILVDIAKSQDSEVGDGTT 98
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 90.2 bits (214), Expect = 1e-18
Identities = 39/93 (41%), Positives = 66/93 (70%)
Frame = +2
Query: 158 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 337
P ++L+D KR +GT ++IQAA+ +A +RT+LGPR + K+++ + G + VTNDG
Sbjct: 6 PVLVLKDS--LKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDG 63
Query: 338 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTT 436
IL+ +D+ H K +++L+++QD+E+GDGTT
Sbjct: 64 NAILREIDIAHPAAKSMIELSRTQDEEVGDGTT 96
Score = 38.3 bits (85), Expect = 0.005
Identities = 23/68 (33%), Positives = 35/68 (51%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
V+VLAG +L A +DK HP I Y A AL LD + A V+ N ++ +
Sbjct: 98 VIVLAGEMLHVAEAFIDKHYHPTVICRAYTKALEDALAVLDKI--AMHVDVNDRAAMLGL 155
Query: 621 AMTTLGSK 644
+++G+K
Sbjct: 156 VKSSIGTK 163
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 87.0 bits (206), Expect = 1e-17
Identities = 38/93 (40%), Positives = 66/93 (70%)
Frame = +2
Query: 158 PFIILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDG 337
P ++L+D KR +GT ++IQAA+ +A +RT+LGP+ + K+++ + G + VTNDG
Sbjct: 6 PVLVLKDS--LKRESGTKVHHANIQAAKAVADIIRTTLGPQSMLKMLLDAAGGIVVTNDG 63
Query: 338 ATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTT 436
IL+ +D+ H K +++L+++QD+E+GDGTT
Sbjct: 64 NCILRELDLAHPAAKSMIELSRTQDEEVGDGTT 96
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
V+VLAG +L A +DK HP I Y A AL+ LD + A PV+ + ++ +
Sbjct: 98 VIVLAGEMLHVAQAFIDKNYHPTVICRAYTKALDDALSVLDKI--AIPVDVDDRVAMLGL 155
Query: 621 AMTTLGSK 644
+++G+K
Sbjct: 156 VKSSIGTK 163
>02_02_0739 - 13560241-13560622,13561192-13561239,13563727-13564949
Length = 550
Score = 79.4 bits (187), Expect = 2e-15
Identities = 36/71 (50%), Positives = 51/71 (71%)
Frame = +2
Query: 224 HIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQ 403
+I AAR +A +RTSLGPRG+DK++ S + +V +TNDGATIL M + ++L +L++
Sbjct: 31 NIAAARAVADAVRTSLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSR 90
Query: 404 SQDDEIGDGTT 436
SQD GDGTT
Sbjct: 91 SQDAAAGDGTT 101
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/70 (42%), Positives = 41/70 (58%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
VVVLAG+LL +A +LL G HP AD A A+ L ++ A P+ + ++L+K
Sbjct: 103 VVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAM--AIPIELSDRDSLVKS 160
Query: 621 AMTTLGSKVV 650
A T L SKVV
Sbjct: 161 ASTALNSKVV 170
>03_05_0339 +
23287620-23287676,23287784-23287849,23287937-23288048,
23288240-23288368,23288795-23288866,23289245-23289360,
23289494-23289570,23289788-23290273,23290373-23290688,
23290769-23290915
Length = 525
Score = 76.2 bits (179), Expect = 2e-14
Identities = 39/92 (42%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Frame = +2
Query: 167 ILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDG--DVTVTNDGA 340
+L+D +++ G A + A IA ++T+LGP+G+DK++ S+ VTVTNDGA
Sbjct: 4 VLKDDAVEEK--GERARMAAFIGAMAIADLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 61
Query: 341 TILKMMDVEHQIGKLLVQLAQSQDDEIGDGTT 436
TILK + +++ K+LV +++ QDDE+GDGTT
Sbjct: 62 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTT 93
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHL--DSVSEAFPVNKNTXENLI 614
VVVLAG LL +A L++ IHP+ I GY MA A L ++ ++K +L+
Sbjct: 95 VVVLAGELLREAEKLVNMKIHPMTIIAGYRMAVECARNALLERTMDNKENIDK-FRSDLM 153
Query: 615 KVAMTTLGSKVV 650
+AMTTL SK++
Sbjct: 154 NIAMTTLSSKIL 165
>05_07_0067 +
27463703-27463705,27464309-27464365,27464779-27464844,
27464985-27465096,27465281-27465409,27466076-27466191,
27466364-27466440,27466678-27467163,27467255-27467570,
27467618-27467797
Length = 513
Score = 74.5 bits (175), Expect = 7e-14
Identities = 37/92 (40%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +2
Query: 167 ILRDQDRQKRLTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDG--DVTVTNDGA 340
+L+D +++ G A + I+ ++T+LGP+G+DK++ S+ VTVTNDGA
Sbjct: 5 LLKDDATEEK--GERARMASFVGGMAISDLVKTTLGPKGMDKILQSTGRGRSVTVTNDGA 62
Query: 341 TILKMMDVEHQIGKLLVQLAQSQDDEIGDGTT 436
TILK + +++ K+LV +++ QDDE+GDGTT
Sbjct: 63 TILKSLHIDNPAAKVLVDISKVQDDEVGDGTT 94
Score = 31.5 bits (68), Expect = 0.61
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIR-IADGYEM-AAALALTHLDS 566
VVVLAG LL +A L++ IHP+ IAD + +A+T L S
Sbjct: 96 VVVLAGELLREAEKLVNMKIHPMTIIADKFRSDLMNIAMTTLSS 139
>03_06_0362 +
33379489-33379624,33380161-33380423,33380524-33380670,
33380753-33380914,33381681-33381758,33382329-33382462,
33382702-33382774,33382852-33382929,33383002-33383124,
33383223-33383317,33383723-33383932,33384115-33384172,
33384268-33384333
Length = 540
Score = 74.5 bits (175), Expect = 7e-14
Identities = 34/85 (40%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Frame = +2
Query: 179 QDRQKRLTGTD-AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKM 355
++ K L+G D A+ +I A R++++ RTSLGP G++K++++ + VTND ATI+
Sbjct: 11 KEGHKHLSGLDEAVLKNIDACRELSAITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNE 70
Query: 356 MDVEHQIGKLLVQLAQSQDDEIGDG 430
++V+H K+LV ++Q +EIGDG
Sbjct: 71 LEVQHPAAKILVLAGRAQQEEIGDG 95
Score = 32.7 bits (71), Expect = 0.26
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 444 VVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKN--TXENLIK 617
+ AG LLE+A L+ G+HP I GY A + L+ + E N + E ++
Sbjct: 100 ISFAGELLEKAEELIRMGLHPSEIIIGYTKAINKTVEILEDLVEKGSENMDVRNKEEVVL 159
Query: 618 VAMTTLGSK 644
+ + + SK
Sbjct: 160 LMRSAVASK 168
>10_08_0620 - 19321612-19323237
Length = 541
Score = 71.3 bits (167), Expect = 6e-13
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Frame = +2
Query: 224 HIQAARQIASTLRTSLGPRGLDKLMVSSD--GD--VTVTNDGATILKMMDVEHQIGKLLV 391
+I A R +A+ RTSLGPRG+DK++ SS GD V +TNDGATIL M + ++L
Sbjct: 31 NIAAGRAVAAAARTSLGPRGMDKMISSSSSGGDQAVIITNDGATILSRMPLLQPAARMLA 90
Query: 392 QLAQSQDDEIGDGTT 436
L++SQD GDGTT
Sbjct: 91 DLSRSQDAAAGDGTT 105
Score = 54.0 bits (124), Expect = 1e-07
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKV 620
VVVLAG+LL +A +LL G HP AD + AA A+ L + A PV + + L+K
Sbjct: 107 VVVLAGSLLRRAQSLLSAGAHPTAAADALHLLAARAVEVLHGM--AIPVELSDRDALVKS 164
Query: 621 AMTTLGSKVV 650
A T L SKVV
Sbjct: 165 ASTALNSKVV 174
>04_04_0729 +
27612106-27612195,27612284-27612370,27612469-27612528,
27612554-27612688,27612769-27612864,27613149-27613214,
27613647-27613864,27614093-27614189,27614605-27614691,
27614892-27615026,27615121-27615225,27615717-27615845,
27615925-27616028,27616598-27616688,27616774-27616857
Length = 527
Score = 70.1 bits (164), Expect = 1e-12
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = +2
Query: 293 LMVSSDGDVTVTNDGATILKMMDVEHQIGKLLVQLAQSQDDEIGDGTT 436
++V GDVT+TNDGATIL+M++VEH K+LV+LA+ QD E+GDGTT
Sbjct: 1 MLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTT 48
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +3
Query: 441 VVVLAGALLEQASNLLDKGIHPIRIADGYEM 533
VV++A LL++ ++L+ IHP I GY +
Sbjct: 50 VVIIAAELLKRGNDLVRNKIHPTSIISGYRL 80
>05_01_0337 -
2658647-2658722,2658797-2658915,2658995-2659102,
2659187-2659255,2659561-2659655,2659740-2659944,
2660125-2660211,2660291-2660405,2660696-2660802,
2661054-2661146,2661243-2661290,2661345-2661544,
2661993-2662128,2662228-2662291,2662779-2662912
Length = 551
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = +2
Query: 197 LTGTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQI 376
L + A+ +I AA+ + L+T+LGP+G K++V GD+ +T DG T+LK M +++
Sbjct: 13 LNKSAALHMNINAAKGLQDVLKTNLGPKGTIKMLVGGAGDIKLTKDGNTLLKEMQIQNPT 72
Query: 377 GKLLVQLAQSQDDEIGDGTT 436
++ + A +QDD GDGTT
Sbjct: 73 AIMIARTAVAQDDTSGDGTT 92
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +3
Query: 444 VVLAGALLEQASNLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIK-V 620
V+ G L++Q+ +D+G HP + DG+++A L L+ + + ++K +
Sbjct: 95 VLFIGELMKQSERCIDEGTHPRFLVDGFDVAKRATLEFLEKFKTSVVMGDEPDREILKMI 154
Query: 621 AMTTLGSKV 647
A TTL +KV
Sbjct: 155 ARTTLRTKV 163
>02_01_0024 +
159595-159801,159892-160017,160201-160338,160431-160526,
160958-161200,161249-161537,161612-161781,161975-162052,
162156-162227,162345-162449,162555-162647,162737-162829,
163109-163235,163317-163330
Length = 616
Score = 47.6 bits (108), Expect = 9e-06
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +2
Query: 212 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQI----G 379
AIK ++A + +LGP+G + ++ S G + NDG T+ K +++E +
Sbjct: 64 AIKKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGA 123
Query: 380 KLLVQLAQSQDDEIGDGTT 436
KL+ Q A +D GDGTT
Sbjct: 124 KLVRQAAAKTNDLAGDGTT 142
>03_01_0305 -
2383187-2383298,2383606-2383684,2383762-2383867,
2383941-2384044,2384141-2384240,2384533-2384628,
2384724-2384801,2385355-2385423,2385511-2385591,
2385670-2385759,2385859-2385945,2386022-2386126,
2386591-2386686,2386796-2386971,2387225-2387384,
2387898-2388029,2388236-2388260,2389023-2389174
Length = 615
Score = 47.2 bits (107), Expect = 1e-05
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Frame = +2
Query: 203 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQI-- 376
G +A ++ ++A ++ ++GP+G ++ S G VT DG T+ K ++ +++
Sbjct: 78 GVEARALMLRGVEELADAVKVTMGPKGRTVVIEQSFGAPKVTKDGVTVAKSIEFSNRVKN 137
Query: 377 --GKLLVQLAQSQDDEIGDGTT 436
L+ Q+A + +D GDGTT
Sbjct: 138 VGASLVKQVANATNDTAGDGTT 159
>06_01_0097 -
810283-810296,810398-810521,810974-811066,811144-811236,
811410-811514,811661-811732,811857-811934,812210-812379,
812507-812741,812832-813074,813243-813338,813445-813582,
814014-814139,814235-814453
Length = 601
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +2
Query: 212 AIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVEHQI----G 379
AIK ++A + +LGP+G + ++ S G + NDG T+ + +++E +
Sbjct: 68 AIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA 127
Query: 380 KLLVQLAQSQDDEIGDGTT 436
KL+ Q A +D GDGTT
Sbjct: 128 KLVRQAAAKTNDLAGDGTT 146
>05_06_0240 -
26629218-26629323,26629412-26629490,26629656-26629761,
26629844-26629947,26630069-26630168,26630256-26630351,
26630464-26630541,26630603-26630671,26630766-26630846,
26630879-26630935,26631016-26631105,26631192-26631278,
26631690-26631794,26631899-26631994,26632222-26632397,
26632847-26633006,26633151-26633600
Length = 679
Score = 43.6 bits (98), Expect = 1e-04
Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Frame = +2
Query: 203 GTDAIKSHIQAARQIASTLRTSLGPRGLDKLMVSSDGDVTVTNDGATILKMMDVE---HQ 373
G A + +Q +A ++ ++GP+G + ++ S VT DG T+ K ++ E
Sbjct: 125 GVGARAALLQGVNDLADAVKVTMGPKGRNVIIERSHRAPKVTKDGVTVAKSIEFEDSAKN 184
Query: 374 IGKLLV-QLAQSQDDEIGDGTT 436
+G LV Q+A++ + GDGTT
Sbjct: 185 VGANLVKQVAEATNKVAGDGTT 206
>09_06_0292 +
22075647-22075691,22077394-22077507,22077602-22077841,
22077926-22078003,22078094-22078162,22078420-22078545,
22079108-22079188,22079272-22079460,22079597-22080434,
22082290-22082411,22082482-22082701,22082910-22083055,
22083260-22083566,22083886-22084136,22084294-22084533,
22084930-22085238
Length = 1124
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Frame = +2
Query: 293 LMVSSDGDVTVTNDGATILKMMD----VEHQIGKLLV----QLAQSQDDEIGDGTT 436
+++ D V NDG TI K ++ VEH LL Q+A + +GDGTT
Sbjct: 597 VVIDQDDVPKVINDGITIAKAIELPNAVEHAGAMLLQEHVNQIASKTNSSVGDGTT 652
>11_06_0065 - 19736265-19737302
Length = 345
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +3
Query: 480 NLLDKGIHPIRIADGYEMAAALALTHLDSVSEAFPVNKNTXENLIKVAMTTLGSK 644
+LL+KG P R+ DGY+ AAA A+ + + A N L ++ TT K
Sbjct: 29 HLLEKGCSP-RLLDGYDTAAAAAVMCWPAAAAAGGGNDAAASVLRRLTTTTTKKK 82
>07_03_1016 - 23313210-23313827,23314649-23314717
Length = 228
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 196 SFLSVLVPQDYKWTAILIKGHR---SREXGPFFTI*TVHKR 83
SFL+V P D WTA+ + H GPF+ + T H+R
Sbjct: 43 SFLAVAKPGDKCWTAVDLSDHLRPIMSFAGPFYAV-TTHQR 82
>07_03_1288 + 25518522-25518797
Length = 91
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 531 MAAALALTHLDSVSEAFPVNKNTXENLIKVAMTTLGSKV 647
+ A A+ H D + F V+++ ENL+ A TLG KV
Sbjct: 51 LKAGRAVRHADRDNSGF-VDESEIENLVAFAQKTLGMKV 88
>03_04_0205 - 18485933-18488446
Length = 837
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 369 IRLVNYLCNWLKVKMTKLVMVPQGVVVLAGALLEQASNLLDKGIHPIRIADGY 527
+R++N + WL +K ++ +P VVL EQ + +L +H R+A Y
Sbjct: 727 MRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRML--WVHSERLALAY 777
>06_03_1277 +
28918140-28918279,28919552-28919761,28920179-28920374,
28920459-28920853,28921024-28921119,28921330-28921402,
28921650-28921935,28923824-28923946,28924123-28924404,
28924513-28924928
Length = 738
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 465 LEQASNLLDKGIHPIRIADGYEMAAALALT 554
L SN LDKG HP+R A Y + + LT
Sbjct: 546 LMTTSNTLDKGSHPLR-AQQYSTSEIMTLT 574
>05_04_0120 - 18175292-18176206,18177315-18177785,18178562-18179635
Length = 819
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2
Query: 362 VEHQIGKLLVQLAQSQDDEIGDGTTGRCCSCWCTP*ASLKS 484
V +IGK+L+ LAQ + +I GT R + TP A LK+
Sbjct: 497 VLQEIGKVLLLLAQRAEYQISTGTEARQVTGTVTP-AQLKN 536
>04_04_1272 -
32288142-32288456,32288538-32288670,32288780-32289020,
32289124-32289340,32289557-32289681,32290873-32292157
Length = 771
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 279 RGPRDVRRVLAICRAACICDFMASVPVSLFC 187
+GPRDV A C A +CD A+ P + FC
Sbjct: 291 QGPRDVCDAYAKCGAFGLCD--ANAPSTSFC 319
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,324,306
Number of Sequences: 37544
Number of extensions: 388619
Number of successful extensions: 995
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -