Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_A02
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49120-1|AAB94634.1|  359|Drosophila melanogaster Y-box protein ...    37   0.027
AY061440-1|AAL28988.1|  352|Drosophila melanogaster LD37574p pro...    37   0.027
AE014296-2093|AAF49961.3|  352|Drosophila melanogaster CG5654-PA...    37   0.027
AY071529-1|AAL49151.1|  508|Drosophila melanogaster RE57384p pro...    29   7.1  
AF441757-1|AAM20921.1|  508|Drosophila melanogaster metallo endo...    29   7.1  
AE013599-1348|AAF58617.2|  508|Drosophila melanogaster CG8988-PA...    29   7.1  
BT010253-1|AAQ23571.1|  497|Drosophila melanogaster RE35348p pro...    28   9.4  

>U49120-1|AAB94634.1|  359|Drosophila melanogaster Y-box protein
           protein.
          Length = 359

 Score = 36.7 bits (81), Expect = 0.027
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 12  PXGEPVKGSPYAADKRRGYHRQYFPRSRLADEAVK 116
           P GEPV+GS +AADKRR + R +  ++R  D  V+
Sbjct: 131 PSGEPVRGSQFAADKRRNF-RPWMKKNRRKDGEVE 164


>AY061440-1|AAL28988.1|  352|Drosophila melanogaster LD37574p
           protein.
          Length = 352

 Score = 36.7 bits (81), Expect = 0.027
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 12  PXGEPVKGSPYAADKRRGYHRQYFPRSRLADEAVK 116
           P GEPV+GS +AADKRR + R +  ++R  D  V+
Sbjct: 131 PSGEPVRGSQFAADKRRNF-RPWMKKNRRKDGEVE 164


>AE014296-2093|AAF49961.3|  352|Drosophila melanogaster CG5654-PA
           protein.
          Length = 352

 Score = 36.7 bits (81), Expect = 0.027
 Identities = 17/35 (48%), Positives = 24/35 (68%)
 Frame = +3

Query: 12  PXGEPVKGSPYAADKRRGYHRQYFPRSRLADEAVK 116
           P GEPV+GS +AADKRR + R +  ++R  D  V+
Sbjct: 131 PSGEPVRGSQFAADKRRNF-RPWMKKNRRKDGEVE 164


>AY071529-1|AAL49151.1|  508|Drosophila melanogaster RE57384p
           protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 471 AWLSLVVVSIVVPTGLLLLGLAPCCWFD 388
           AWL L+  ++V   GL L+   PC  FD
Sbjct: 426 AWLLLLKYNVVFSIGLALINAIPCFGFD 453


>AF441757-1|AAM20921.1|  508|Drosophila melanogaster metallo
           endopeptidase protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 471 AWLSLVVVSIVVPTGLLLLGLAPCCWFD 388
           AWL L+  ++V   GL L+   PC  FD
Sbjct: 426 AWLLLLKYNVVFSIGLALINAIPCFGFD 453


>AE013599-1348|AAF58617.2|  508|Drosophila melanogaster CG8988-PA
           protein.
          Length = 508

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 471 AWLSLVVVSIVVPTGLLLLGLAPCCWFD 388
           AWL L+  ++V   GL L+   PC  FD
Sbjct: 426 AWLLLLKYNVVFSIGLALINAIPCFGFD 453


>BT010253-1|AAQ23571.1|  497|Drosophila melanogaster RE35348p
           protein.
          Length = 497

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +1

Query: 271 PNEXRRVPPSAXAQFPGGAGRTKSXSAPKWPGWR 372
           PNE R +  S  A+ P  AGR +    P  P WR
Sbjct: 229 PNERRFIESSGQARSPSDAGREEQPRPPT-PWWR 261


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,737,442
Number of Sequences: 53049
Number of extensions: 491453
Number of successful extensions: 1467
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)