Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_A01
(373 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 40 0.011
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 38 0.044
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 38 0.044
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 36 0.23
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 33 1.3
UniRef50_A6LJY0 Cluster: Putative uncharacterized protein; n=1; ... 32 2.9
UniRef50_Q4QAF6 Cluster: Putative uncharacterized protein; n=3; ... 31 6.7
UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2; Sophophora|... 31 8.8
UniRef50_A5KDQ5 Cluster: Early transcribed membrane protein; n=1... 31 8.8
UniRef50_A4RPT4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.8
UniRef50_Q07436 Cluster: Protein expanded; n=3; cellular organis... 31 8.8
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 40.3 bits (90), Expect = 0.011
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +2
Query: 215 LITDKEKAXKLKQSLPPGLQ 274
+ITDKEKA KLKQSLPPGLQ
Sbjct: 46 VITDKEKAEKLKQSLPPGLQ 65
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 38.3 bits (85), Expect = 0.044
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 215 LITDKEKAXKLKQSLPPGL 271
+ITDKEKA KLKQSLPPGL
Sbjct: 395 VITDKEKAEKLKQSLPPGL 413
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 38.3 bits (85), Expect = 0.044
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +2
Query: 215 LITDKEKAXKLKQSLPPGL 271
+ITDKEKA KLKQSLPPGL
Sbjct: 46 VITDKEKAEKLKQSLPPGL 64
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 35.9 bits (79), Expect = 0.23
Identities = 14/20 (70%), Positives = 18/20 (90%)
Frame = +2
Query: 215 LITDKEKAXKLKQSLPPGLQ 274
++ DK+KA KLKQSLPPG+Q
Sbjct: 46 VVADKDKAEKLKQSLPPGIQ 65
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 33.5 bits (73), Expect = 1.3
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 4/30 (13%)
Frame = +2
Query: 194 RLPCTPWLIT----DKEKAXKLKQSLPPGL 271
++ C+ +L T D+EKA KLKQSLPPGL
Sbjct: 35 KVRCSRYLYTLCVFDQEKADKLKQSLPPGL 64
>UniRef50_A6LJY0 Cluster: Putative uncharacterized protein; n=1;
Thermosipho melanesiensis BI429|Rep: Putative
uncharacterized protein - Thermosipho melanesiensis
BI429
Length = 368
Score = 32.3 bits (70), Expect = 2.9
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 118 GKTPNSRQNKRRTLQNVNVQGFDCSTASLYT 210
GKTP + QN+R L+N+N +GF + T
Sbjct: 206 GKTPRNIQNEREILKNLNKEGFSIKIVGIKT 236
>UniRef50_Q4QAF6 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 738
Score = 31.1 bits (67), Expect = 6.7
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Frame = +2
Query: 23 TAAWLENYSVFNTARAETQT-----ISTRLFNLTATEERRQTPVKINEEPCRMSTFKAST 187
++ + ++Y +NT AETQ+ +S + + T E + + EPC M S+
Sbjct: 66 SSVFAQSYKTWNTCPAETQSHAAEPVSAKDVSKTVDEGAAEAYGAVQHEPCAM----GSS 121
Query: 188 AQRLP--CTPWLITD 226
+R P CTP + TD
Sbjct: 122 PRRKPGHCTPSVSTD 136
>UniRef50_Q9VUL6 Cluster: CG12316-PA, isoform A; n=2;
Sophophora|Rep: CG12316-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 1188
Score = 30.7 bits (66), Expect = 8.8
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 62 ARAETQTISTRLFNLTATEERRQTPVKINEEPCRMSTFKASTAQRLPCTP 211
AR+E + +ST T + TP KI+ P R+ + + LP P
Sbjct: 611 ARSEAENVSTSQLTPTTSNASSSTPTKISGTPTRIRSTQRGQRVALPTPP 660
>UniRef50_A5KDQ5 Cluster: Early transcribed membrane protein; n=1;
Plasmodium vivax|Rep: Early transcribed membrane protein
- Plasmodium vivax
Length = 741
Score = 30.7 bits (66), Expect = 8.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +2
Query: 119 ERRQTPVKINEEPCRMSTFKASTAQRLPCTPWLITDKEKAXKLKQSLPP 265
E++ P K + P + ++ K ST+ + P P T +++ KQS PP
Sbjct: 626 EKQSAPEKHSTPPKQSTSPKESTSPKQPAPPKPSTSPKQSAPAKQSAPP 674
>UniRef50_A4RPT4 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 893
Score = 30.7 bits (66), Expect = 8.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 122 RRQTPVKINEEPCRMSTFKASTAQRLP-CTPWLITDKEKAXKLKQSLPPGLQ 274
R+ + N + S+++ STA R P +PW+ + S+PPGLQ
Sbjct: 692 RKPSAPSSNGDGVGESSYRPSTAGRRPSASPWIPQQAHRPSIAASSVPPGLQ 743
>UniRef50_Q07436 Cluster: Protein expanded; n=3; cellular
organisms|Rep: Protein expanded - Drosophila
melanogaster (Fruit fly)
Length = 1427
Score = 30.7 bits (66), Expect = 8.8
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 104 LTATEERRQTPVKINEEPCRMSTFKASTAQR--LPCTPWLITDKEKAXKLKQSLPPGL 271
L+AT + + NE R+ST+ AST++R +P P L + +++ LP GL
Sbjct: 204 LSATTTLPKISKRANERMLRLSTYVASTSKRETIPLPPSLPPNGADYYRIEDYLPSGL 261
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,312,766
Number of Sequences: 1657284
Number of extensions: 4790650
Number of successful extensions: 12249
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12245
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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