Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_A01
         (373 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical pr...    36   0.009
AF043699-4|AAB97568.1|  610|Caenorhabditis elegans Serotonin/oct...    28   1.9  
U41023-3|AAA82342.2|  435|Caenorhabditis elegans Arrestin family...    27   5.7  
Z48809-8|CAA88748.2|  535|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z48795-8|CAA88732.2|  535|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z81097-10|CAB03169.1|  492|Caenorhabditis elegans Hypothetical p...    26   9.9  
DQ384615-1|ABD34785.1|  492|Caenorhabditis elegans ERGIC-53-like...    26   9.9  

>Z81463-5|CAB03853.1|   70|Caenorhabditis elegans Hypothetical
           protein C06B8.8 protein.
          Length = 70

 Score = 35.9 bits (79), Expect = 0.009
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +2

Query: 215 LITDKEKAXKLKQSLPPGLQ 274
           ++ DK+KA KLKQSLPPG+Q
Sbjct: 46  VVADKDKAEKLKQSLPPGIQ 65


>AF043699-4|AAB97568.1|  610|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 3 protein.
          Length = 610

 Score = 28.3 bits (60), Expect = 1.9
 Identities = 11/43 (25%), Positives = 24/43 (55%)
 Frame = +2

Query: 8   FWTPLTAAWLENYSVFNTARAETQTISTRLFNLTATEERRQTP 136
           F+ P+       + ++  ARA T++I + + ++TA   ++Q P
Sbjct: 228 FYIPMIIVVFVYFRIYVAARAATKSIYSGMMSVTAAANKKQNP 270


>U41023-3|AAA82342.2|  435|Caenorhabditis elegans Arrestin family
           protein 1 protein.
          Length = 435

 Score = 26.6 bits (56), Expect = 5.7
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 165 CQRSRLRLLNGFPVHPGSSLTK 230
           C+ +R+    GFPV PG +L+K
Sbjct: 263 CEVARIESNEGFPVGPGGTLSK 284


>Z48809-8|CAA88748.2|  535|Caenorhabditis elegans Hypothetical
           protein T01E8.1 protein.
          Length = 535

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 145 KRRTLQNVNVQGFDCSTASLYTLA 216
           KR  L+ V ++G  C+  S+YTLA
Sbjct: 455 KRCPLREVRIRGTACTDKSIYTLA 478


>Z48795-8|CAA88732.2|  535|Caenorhabditis elegans Hypothetical
           protein T01E8.1 protein.
          Length = 535

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 145 KRRTLQNVNVQGFDCSTASLYTLA 216
           KR  L+ V ++G  C+  S+YTLA
Sbjct: 455 KRCPLREVRIRGTACTDKSIYTLA 478


>Z22179-1|CAA80169.1|  254|Caenorhabditis elegans Hypothetical
           protein F58A4.1 protein.
          Length = 254

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 13/44 (29%), Positives = 19/44 (43%)
 Frame = +2

Query: 59  TARAETQTISTRLFNLTATEERRQTPVKINEEPCRMSTFKASTA 190
           T    T T+ST    LT   E   TP+  +  P   ++   ST+
Sbjct: 65  TTSISTSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTS 108


>Z81097-10|CAB03169.1|  492|Caenorhabditis elegans Hypothetical
           protein K07A1.8 protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 16/64 (25%), Positives = 23/64 (35%)
 Frame = +3

Query: 42  TIPSSTLPALKLKRYQHDFLT*RRRRKDAKLPSK*TKNPAECQRSRLRLLNGFPVHPGSS 221
           TI +   P  K   Y+H F      ++D  +P       A     +LRL        G +
Sbjct: 16  TIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQLRLAPSMRSRKGIA 75

Query: 222 LTKR 233
             KR
Sbjct: 76  WNKR 79


>DQ384615-1|ABD34785.1|  492|Caenorhabditis elegans ERGIC-53-like
           protein protein.
          Length = 492

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 16/64 (25%), Positives = 23/64 (35%)
 Frame = +3

Query: 42  TIPSSTLPALKLKRYQHDFLT*RRRRKDAKLPSK*TKNPAECQRSRLRLLNGFPVHPGSS 221
           TI +   P  K   Y+H F      ++D  +P       A     +LRL        G +
Sbjct: 16  TIQAQNTPVFKKFEYKHSFRAPNLAQRDGSIPFWIVSGDAIASGEQLRLAPSMRSRKGIA 75

Query: 222 LTKR 233
             KR
Sbjct: 76  WNKR 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,498,618
Number of Sequences: 27780
Number of extensions: 115629
Number of successful extensions: 266
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 262
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)