Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P24
(654 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011096-1|AAR82762.1| 464|Drosophila melanogaster RE30726p pro... 97 1e-20
AE014134-1857|AAS64675.1| 458|Drosophila melanogaster CG33303-P... 97 1e-20
BT001395-1|AAN71150.1| 371|Drosophila melanogaster GH05770p pro... 68 1e-11
BT022188-1|AAY51582.1| 387|Drosophila melanogaster IP01201p pro... 30 2.4
AE013599-935|AAF58895.1| 387|Drosophila melanogaster CG1663-PA ... 30 2.4
X51968-1|CAA36226.1| 471|Drosophila melanogaster protein ( Dros... 29 5.5
>BT011096-1|AAR82762.1| 464|Drosophila melanogaster RE30726p
protein.
Length = 464
Score = 97.5 bits (232), Expect = 1e-20
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +1
Query: 121 SSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSPVKHFLFAVEEAAKNNLXFIGAKDSN 300
+ +I NV+RT+D+++QLVK +KI E+S P+ ++F E + L +I KD++
Sbjct: 36 NGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKDAS 92
Query: 301 SKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQ 477
K + VKG F P A A +VETV +K ++P+P I Q + Q
Sbjct: 93 DKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQNDKQ 146
Query: 478 FVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKGEAFLTS 603
FVKY GNL+ YS Y T++QKT+V L++ + S T+ + F S
Sbjct: 147 FVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVS 188
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 563 LLNHLPRVKPFSQVDGTIIYGPYANVGPFT 652
+L+H +VKPFS I GPY NV F+
Sbjct: 176 ILSHT-QVKPFSVSSNKITLGPYENVEAFS 204
>AE014134-1857|AAS64675.1| 458|Drosophila melanogaster CG33303-PA
protein.
Length = 458
Score = 97.5 bits (232), Expect = 1e-20
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +1
Query: 121 SSDIKLKNVDRTVDISTQLVKVVSKIVLENSGKSPVKHFLFAVEEAAKNNLXFIGAKDSN 300
+ +I NV+RT+D+++QLVK +KI E+S P+ ++F E + L +I KD++
Sbjct: 30 NGEIVNTNVERTLDLTSQLVKTTTKISAEDSAGKPIVEYVFFTSEPS---LAYIDVKDAS 86
Query: 301 SKDLRLAETT-VKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQ 477
K + VKG F P A A +VETV +K ++P+P I Q + Q
Sbjct: 87 DKSVPFKRNEPVKGEQSFTF-----TFP-RAAAKQTFIVETVASKGIRPHPEEIRQNDKQ 140
Query: 478 FVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKGEAFLTS 603
FVKY GNL+ YS Y T++QKT+V L++ + S T+ + F S
Sbjct: 141 FVKYTGNLHLYSKYRTNSQKTNVKLSSSNILSHTQVKPFSVS 182
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 563 LLNHLPRVKPFSQVDGTIIYGPYANVGPFT 652
+L+H +VKPFS I GPY NV F+
Sbjct: 170 ILSHT-QVKPFSVSSNKITLGPYENVEAFS 198
>BT001395-1|AAN71150.1| 371|Drosophila melanogaster GH05770p
protein.
Length = 371
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/72 (44%), Positives = 47/72 (65%)
Frame = +1
Query: 388 AGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTV 567
A A +VETV +K ++P+P I Q + QFVKY GNL+ YS Y T++QKT+V L++ +
Sbjct: 24 AAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHLYSKYRTNSQKTNVKLSSSNI 83
Query: 568 ESFTKGEAFLTS 603
S T+ + F S
Sbjct: 84 LSHTQVKPFSVS 95
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 563 LLNHLPRVKPFSQVDGTIIYGPYANVGPFT 652
+L+H +VKPFS I GPY NV F+
Sbjct: 83 ILSHT-QVKPFSVSSNKITLGPYENVEAFS 111
>BT022188-1|AAY51582.1| 387|Drosophila melanogaster IP01201p
protein.
Length = 387
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Frame = +3
Query: 387 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 530
RR H K CC +C Q +T+ NSAR+ C+ CW+ L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361
>AE013599-935|AAF58895.1| 387|Drosophila melanogaster CG1663-PA
protein.
Length = 387
Score = 30.3 bits (65), Expect = 2.4
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 10/58 (17%)
Frame = +3
Query: 387 RRCHS--KCCCRNCVHQ--SFTTISDSY------NSARRPVCEICWQFVYILPVLYLH 530
RR H K CC +C Q +T+ NSAR+ C+ CW+ L +L LH
Sbjct: 304 RRTHDQPKLCCPHCSRQFRENSTLKSHIRKIHDGNSARQVSCDFCWRRFKTLELLKLH 361
>X51968-1|CAA36226.1| 471|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 471
Score = 29.1 bits (62), Expect = 5.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 363 CGAQGTPKRRCHSKCCCRNCVHQ 431
CG QG +C + CRNC H+
Sbjct: 422 CGQQGHTAAKCQNPVDCRNCRHR 444
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,834,287
Number of Sequences: 53049
Number of extensions: 616802
Number of successful extensions: 1442
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1372
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1440
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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