Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_P22
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0455 + 17903921-17904046,17904149-17904214,17905028-179051...    75   5e-14
01_07_0051 - 40759529-40759624,40759728-40759835,40759972-407601...    68   5e-12
01_07_0050 - 40751994-40752086,40752193-40752300,40752501-407526...    66   2e-11
01_07_0052 - 40767252-40767347,40767455-40767562,40767689-407678...    56   3e-08
06_03_1175 + 28168007-28170058                                         29   2.3  
03_02_0270 - 7011363-7012302,7013237-7013640,7014264-7014333,701...    28   5.3  
07_03_1348 + 25945444-25945551,25946411-25946607,25946732-259468...    28   7.0  
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757...    28   7.0  

>11_04_0455 +
           17903921-17904046,17904149-17904214,17905028-17905116,
           17905513-17905658,17905743-17905867,17905964-17906057,
           17906144-17906307,17906449-17906610,17906683-17906809,
           17906854-17906862,17906912-17907078,17907113-17907307,
           17907398-17907490
          Length = 520

 Score = 74.9 bits (176), Expect = 5e-14
 Identities = 48/108 (44%), Positives = 59/108 (54%), Gaps = 5/108 (4%)
 Frame = +3

Query: 288 TAVLTHVGLYVLMFL-----GFVNQLIFKPKAATXKNREGYAPLYDPFEQFFSRYVYRRV 452
           T  LT +  Y L+F       F  +LI   KA   KN +GYAP+    E F+ R +Y R+
Sbjct: 7   TTALTTLFSYGLLFAFGQLRDFFRKLIDWFKA---KNVKGYAPICLGLEDFYVRRLYLRI 63

Query: 453 RHCFNRPICSAPGAEVVLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 596
           + CF RPI SAP A   + E  S D N T K T    RC+NLGSYNYL
Sbjct: 64  QDCFGRPIASAPDAWFDVVERYSNDSNKTLKRTSNTTRCLNLGSYNYL 111


>01_07_0051 -
           40759529-40759624,40759728-40759835,40759972-40760138,
           40760670-40760796,40760885-40761046,40761235-40761398,
           40761561-40761654,40761736-40761860,40762304-40762449,
           40762796-40762884,40763453-40763518,40763824-40763973
          Length = 497

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 37/77 (48%), Positives = 43/77 (55%)
 Frame = +3

Query: 366 AATXKNREGYAPLYDPFEQFFSRYVYRRVRHCFNRPICSAPGAEVVLKEWESTDHNWTFK 545
           AA   N +GYAP+    E F+ R   RRV+ CF RPI S P A   + E  S D N T  
Sbjct: 43  AAAGTNLKGYAPICGGQEDFYYRRFVRRVQDCFWRPIASKPDAWFDVVERYSNDSNKTLH 102

Query: 546 FTGVERRCVNLGSYNYL 596
            T    RC+NLGSYNYL
Sbjct: 103 RTTKTSRCLNLGSYNYL 119


>01_07_0050 -
           40751994-40752086,40752193-40752300,40752501-40752667,
           40752756-40752882,40752984-40753145,40753674-40753837,
           40753931-40754024,40754160-40754284,40754387-40754532,
           40754676-40754764,40755524-40755589,40755990-40756148
          Length = 499

 Score = 66.1 bits (154), Expect = 2e-11
 Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = +3

Query: 345 QLIFKPKAATXK----NREGYAPLYDPFEQFFSRYVYRRVRHCFNRPICSAPGAEVVLKE 512
           +L+F   AA       N +GYAP+    E F+ R  +RRV+ CF RPI S P A   + E
Sbjct: 35  RLLFSSAAAADSPAGCNSKGYAPICVGKEDFYIRRFFRRVQDCFGRPIASKPDAWFDVVE 94

Query: 513 WESTDHNWTFKFTGVERRCVNLGSYNYL 596
             STD N T   T    +C+NL S+NYL
Sbjct: 95  RYSTDSNKTLHCTTKTSKCLNLASFNYL 122


>01_07_0052 -
           40767252-40767347,40767455-40767562,40767689-40767855,
           40767930-40768056,40768138-40768299,40768467-40768630,
           40768722-40768815,40768892-40769016,40769110-40769255,
           40769361-40769449,40769564-40769608,40770165-40770230,
           40770332-40770457
          Length = 504

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
 Frame = +3

Query: 366 AATXKNREGYAPLYDPFEQFFSRYVYRRVRH---------------CFNRPICSAPGAEV 500
           A    N +GYAP+    E F++R +Y R++                CF RPI SAP A  
Sbjct: 35  AGKSSNLKGYAPICLGLEDFYTRRLYLRIQEVGISEPYRLITPAMDCFGRPIASAPDAWF 94

Query: 501 VLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 596
            + E  S D N T   T    +C+NLGSYNYL
Sbjct: 95  DVVERYSNDSNKTLHRTTKTSKCLNLGSYNYL 126


>06_03_1175 + 28168007-28170058
          Length = 683

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 345 QLIFKPKAATXKNREGYAPLYDPFEQFFSRYVYRRVRHCFNRPI 476
           + I+K + A   N+EG A +Y P   ++  + +     C  RPI
Sbjct: 272 EFIYKMRGAYTLNKEGPACVYSPAAGYYKDFDFTPAYSCEKRPI 315


>03_02_0270 -
           7011363-7012302,7013237-7013640,7014264-7014333,
           7014835-7015331,7015959-7016283,7018060-7018292
          Length = 822

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 164 EVHAV*WINAEXDTSGG-RRPAKDRLVQVRHVPGLVREVFPTDRRPHARWTL 316
           EV A  W  AE +   G RR  +  LV+ R +PG +R+     R     W L
Sbjct: 8   EVEAARWAEAEDERKEGLRRRRRYGLVEYRALPGYMRDNEYILRHYRCEWPL 59


>07_03_1348 +
           25945444-25945551,25946411-25946607,25946732-25946804,
           25947003-25947092,25947410-25947465,25947559-25947738,
           25947813-25948006,25948095-25948234,25948324-25948466,
           25948549-25948697,25948784-25949148,25949264-25949368
          Length = 599

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = -1

Query: 463 KQCRTRRYTYREKNCSNGSYSGAYPSLFXSVAALGLNMSWLT 338
           +QCR R Y Y    C  G +S     L   ++ L  NM  +T
Sbjct: 97  RQCRRRWYNYLNSECKKGGWSREEDLLLCEISELA-NMRSVT 137


>03_06_0415 -
           33775143-33775305,33775438-33775565,33775654-33775761,
           33775809-33775909,33776265-33776805,33777290-33777847
          Length = 532

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = +3

Query: 72  DGDSLKTTKKSYEQDEKLINGKIKDRKNGYMKSTQSNGSTPXMTQVEGGGLPKIDWSKYD 251
           D +  K  +K  E+DEK    K ++ +   ++       T  +T  +  GLP I  SK  
Sbjct: 420 DIEKKKEERKQKERDEKEKQEKTEEYRRNCIQCVMGPEGT-VVTFPDKMGLPSIFDSKPI 478

Query: 252 TFPGSFEKCS 281
           ++P   EKC+
Sbjct: 479 SYPPPREKCA 488


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,215,183
Number of Sequences: 37544
Number of extensions: 330283
Number of successful extensions: 995
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)