Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P22
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoy... 86 2e-17
U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoy... 86 2e-17
Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical pr... 74 1e-13
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 31 0.68
Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical p... 28 6.3
Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.3
U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical pr... 28 6.3
AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical... 28 6.3
AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical... 28 6.3
Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U50307-2|AAA92303.1| 558|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform a protein.
Length = 558
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/101 (43%), Positives = 56/101 (55%)
Frame = +3
Query: 294 VLTHVGLYVLMFLGFVNQLIFKPKAATXKNREGYAPLYDPFEQFFSRYVYRRVRHCFNRP 473
V H+ YV F GFV L K A + + PL+ FE F+ R Y +VR F RP
Sbjct: 89 VFAHIREYVTRF-GFVKDLSSKENA----KMKDFVPLFSDFEAFYQRNCYIKVRDVFERP 143
Query: 474 ICSAPGAEVVLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 596
ICS PGA V L + S D NWT+++ G +N+GSYNYL
Sbjct: 144 ICSVPGATVDLVDRVSHDGNWTYEYPGTRTNVINVGSYNYL 184
>U50307-1|AAK71365.1| 586|Caenorhabditis elegans Serine palmitoyl
transferase familyprotein 2, isoform b protein.
Length = 586
Score = 85.8 bits (203), Expect = 2e-17
Identities = 44/101 (43%), Positives = 56/101 (55%)
Frame = +3
Query: 294 VLTHVGLYVLMFLGFVNQLIFKPKAATXKNREGYAPLYDPFEQFFSRYVYRRVRHCFNRP 473
V H+ YV F GFV L K A + + PL+ FE F+ R Y +VR F RP
Sbjct: 117 VFAHIREYVTRF-GFVKDLSSKENA----KMKDFVPLFSDFEAFYQRNCYIKVRDVFERP 171
Query: 474 ICSAPGAEVVLKEWESTDHNWTFKFTGVERRCVNLGSYNYL 596
ICS PGA V L + S D NWT+++ G +N+GSYNYL
Sbjct: 172 ICSVPGATVDLVDRVSHDGNWTYEYPGTRTNVINVGSYNYL 212
>Z81127-5|CAB03390.2| 512|Caenorhabditis elegans Hypothetical
protein T22G5.5 protein.
Length = 512
Score = 73.7 bits (173), Expect = 1e-13
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +3
Query: 351 IFKPKAATXKNR-EGYAPLYDPFEQFFSRYVYRRVRHCFNRPICSAPGAEVVLKEWESTD 527
I K K + R E + PL + F+ ++ ++YR+ NRPI PGA V LK+ + D
Sbjct: 63 IVKTKRSKGDPRMESFQPLGNSFDATYTDHIYRQSTDVVNRPISGVPGAIVRLKDRYTDD 122
Query: 528 HNWTFKFTGVERRCVNLGSYNYL 596
H WT K+TG E +NLGSYNYL
Sbjct: 123 HGWTQKYTGTESEVINLGSYNYL 145
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 31.1 bits (67), Expect = 0.68
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = -1
Query: 145 SFIL-PLINFSSCSYDFLV----VFSESPSPISTKPFF 47
SF++ P IN +CS + L +FS SP P T PF+
Sbjct: 167 SFVIKPQINLKNCSRELLSPKSSIFSSSPKPKETSPFY 204
>Z98866-23|CAB11557.2| 399|Caenorhabditis elegans Hypothetical
protein Y49E10.24 protein.
Length = 399
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -3
Query: 593 VVVRAQVDAAPLHARELESPIVIGAFPLLEDDFGSRRRAYRSV 465
VVV+ V + + E PI+IG+ PL ++ R Y+ V
Sbjct: 300 VVVKLHVKCRMRNTVKAECPIIIGSKPLADEHVDPRTPTYQEV 342
>Z93385-1|CAB07638.1| 312|Caenorhabditis elegans Hypothetical
protein M01E5.1 protein.
Length = 312
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Frame = +3
Query: 381 NREGYAPLYDPFEQFFSRYV---YRRVRHCFN-RPICSAP 488
NR+G+ PLY F+ + V R R CFN C AP
Sbjct: 194 NRDGFKPLYLQFQDNYDLEVGQLCRTQRDCFNTATFCQAP 233
>U50135-6|AAN63429.1| 925|Caenorhabditis elegans Hypothetical
protein C52E12.1 protein.
Length = 925
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = -3
Query: 431 REELLERIVQRSVPLSVXXXXXXXLEYELVDEAQEHENVKSNVR 300
REE E I +R VP +V L ++ VD+ +N KSN++
Sbjct: 512 REEDDEYISRRDVPQAVVKVNNSLLRFDTVDDRVIPQNAKSNIQ 555
>AL117195-31|CAN99709.1| 1459|Caenorhabditis elegans Hypothetical
protein Y57A10A.18b protein.
Length = 1459
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -3
Query: 419 LERIVQRSVPLSVXXXXXXXLEYELVDEAQEHENVKSNVREDGGQ*GTLLERARERVVLG 240
L+ I Q+S+ + EL D ++ E + + + GGQ ++ ERAR V
Sbjct: 1002 LQTIRQQSIEIVEREKERDRARKELEDVTRQKEKFEKDKKAVGGQLTSMTERARAAEVCV 1061
Query: 239 PVYLWQAA 216
W AA
Sbjct: 1062 MENKWTAA 1069
>AL117195-30|CAB60772.3| 1456|Caenorhabditis elegans Hypothetical
protein Y57A10A.18a protein.
Length = 1456
Score = 27.9 bits (59), Expect = 6.3
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = -3
Query: 419 LERIVQRSVPLSVXXXXXXXLEYELVDEAQEHENVKSNVREDGGQ*GTLLERARERVVLG 240
L+ I Q+S+ + EL D ++ E + + + GGQ ++ ERAR V
Sbjct: 1002 LQTIRQQSIEIVEREKERDRARKELEDVTRQKEKFEKDKKAVGGQLTSMTERARAAEVCV 1061
Query: 239 PVYLWQAA 216
W AA
Sbjct: 1062 MENKWTAA 1069
>Z81494-4|CAB04050.2| 319|Caenorhabditis elegans Hypothetical
protein F02E9.3 protein.
Length = 319
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 469 DRYARRLEPKSSSRSGKAPITIGLSSSRAWS 561
DR ++ +PKSSS+ GK + + S+ WS
Sbjct: 73 DRKSKEGKPKSSSKHGKRMTSRAIHVSKKWS 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,270,109
Number of Sequences: 27780
Number of extensions: 274655
Number of successful extensions: 905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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