Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_P21
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   1.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   2.6  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   6.0  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.0  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              21   7.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.9  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.9  

>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 272 DLLYSVGVQSFRHYENLN 219
           DL+ ++G + F HYE+ N
Sbjct: 268 DLILTLGKKEFSHYEHQN 285


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 100 PKRNRPQLFLIGTVLLVNIFVLYF 171
           P+ N P LF+IG V   N    YF
Sbjct: 26  PQLNNPTLFMIGGVFSNNKSKKYF 49


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 591 AAQQHLQASEQRV 629
           A QQHLQA EQ +
Sbjct: 190 AQQQHLQAHEQHM 202


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 426 LVXKSIEAIDLGLGEAQVMTALASHL 503
           ++  S+ A + GLG +  +TAL+S L
Sbjct: 597 VIASSVSAGEEGLGNSLAITALSSIL 622


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 13  AHEGRACPISTRIPGT 60
           AH  + CP  T+ PGT
Sbjct: 85  AHTVKYCPKGTKNPGT 100


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 35  LYLPAYPAHNLNY 73
           LY  A  +HNLNY
Sbjct: 262 LYYSAMSSHNLNY 274


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 35  LYLPAYPAHNLNY 73
           LY  A  +HNLNY
Sbjct: 263 LYYSALSSHNLNY 275


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,804
Number of Sequences: 438
Number of extensions: 3005
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)