Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_P20
         (482 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   1.0  
AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase...    24   2.4  
AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450 CY...    23   7.3  
AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding pr...    23   7.3  
AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding pr...    23   7.3  

>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -1

Query: 305 EHQXRGEMTPHLFSLPVRFTTILPA--L*SSTISNSPM*PCFIITVKNLTMTLEXGPDED 132
           E+   G+M  HLF +   F++++ A     S++  + +      +  +LT TLE   D+D
Sbjct: 107 EYDESGDMEAHLFRMDELFSSLMNAGQELDSSLKVAMVLKSMPESYDHLTTTLETRSDDD 166

Query: 131 LS 126
           L+
Sbjct: 167 LT 168


>AF004915-1|AAB94671.1|  688|Anopheles gambiae pro-phenol oxidase
           subunit 1 protein.
          Length = 688

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
 Frame = +2

Query: 302 VPINDIERWTNLLPSRQFGYLVLTTSGG-IMDHEEXXXKHLGGKI*AS 442
           V +ND+ERW + +        VL  SG  IM  E+     LG  + AS
Sbjct: 304 VSVNDLERWRDRIHEAIDQGFVLDKSGNRIMLDEQRGIDILGDVVEAS 351


>AY176048-1|AAO19579.1|  521|Anopheles gambiae cytochrome P450
           CYP12F4 protein.
          Length = 521

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 314 DIERWTNLLPSRQFGYLVLTTSGGIMDHEE 403
           D   W N       G LVL +  G++D ++
Sbjct: 198 DFNEWLNRWAFETMGVLVLDSRLGVLDKDQ 227


>AY146747-1|AAO12062.1|  288|Anopheles gambiae odorant-binding
           protein AgamOBP42 protein.
          Length = 288

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 299 DVPINDIERWTN 334
           D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176


>AJ618931-1|CAF02009.1|  288|Anopheles gambiae odorant-binding
           protein OBPjj83d protein.
          Length = 288

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +2

Query: 299 DVPINDIERWTN 334
           D+P +D E+WT+
Sbjct: 165 DIPFSDFEQWTS 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 421,557
Number of Sequences: 2352
Number of extensions: 7320
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)