Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_P19
         (565 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      22   3.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   3.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.3  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   9.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.6  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.6  

>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 563 PVSXLYTDWKVSTFMFNSCL 504
           P+  L T WK++ F+ + CL
Sbjct: 3   PLLSLVTLWKLTIFLSSMCL 22


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 526 LLCSIVVCWFLSKC 485
           LL  ++ CW +SKC
Sbjct: 217 LLYRLLRCWLISKC 230


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 526 LLCSIVVCWFLSKC 485
           LL  ++ CW +SKC
Sbjct: 217 LLYRLLRCWLISKC 230


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 382 NVLERGLFC 356
           N +ERGLFC
Sbjct: 128 NCIERGLFC 136


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 493 TKTNRQLLNIKVDTFQSVY 549
           TK+N  +L   VDTF  ++
Sbjct: 98  TKSNIFILKESVDTFNDIF 116


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 110 RNQLRPQSPTSGA 148
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +2

Query: 110 RNQLRPQSPTSGA 148
           R Q++PQSP+S +
Sbjct: 19  RMQIKPQSPSSSS 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,839
Number of Sequences: 336
Number of extensions: 2250
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)