Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_P10
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0816 + 6526638-6527567,6527993-6528028                           29   4.2  
10_08_0674 + 19788198-19789817                                         28   5.6  
03_02_0354 + 7760124-7761407,7762802-7762858                           28   5.6  
01_06_0433 - 29311749-29311859,29311958-29312116,29312208-293123...    28   5.6  
01_03_0242 + 14113721-14113966,14114102-14114260,14114495-141148...    28   5.6  
10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010           28   7.4  
09_06_0053 - 20537433-20537833,20537910-20538456                       28   7.4  
05_03_0375 - 13244887-13244961,13245084-13245215,13247018-132471...    28   7.4  

>07_01_0816 + 6526638-6527567,6527993-6528028
          Length = 321

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +2

Query: 470 WPTALLHHAHHQVDPKETVHRLINQLMAHNVPAL 571
           W   L+  AHH V   E+VH +I +L   + P +
Sbjct: 38  WTLPLIGSAHHLVSWSESVHSVIGKLAREHGPVM 71


>10_08_0674 + 19788198-19789817
          Length = 539

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 8/61 (13%)
 Frame = -1

Query: 462 LSTSMQSFNXIINLLCHAFWGNFHRCTNGFSK*R--------WFRF*CF*PRTCAWTCCK 307
           L+++  + N +I LL   +    HR T GFS  R        W R       +CA  C +
Sbjct: 236 LASAWANLNLVIFLLAFVYVSGVHRDTGGFSLPRKMFKDVDGWVRLVRLAAESCASVCLE 295

Query: 306 W 304
           W
Sbjct: 296 W 296


>03_02_0354 + 7760124-7761407,7762802-7762858
          Length = 446

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +1

Query: 349 ESKPSSFGESVSAPVKITPERMAQEI 426
           E +    GES  APVK  P R+ QE+
Sbjct: 19  EEESKGKGESTGAPVKYLPARLRQEV 44


>01_06_0433 -
           29311749-29311859,29311958-29312116,29312208-29312315,
           29312449-29312531,29312617-29312786,29312833-29312903,
           29313170-29313302,29313483-29313749,29313865-29313969,
           29314053-29314144,29314263-29314363,29314426-29314552,
           29315025-29315140,29315222-29315291,29315476-29315685
          Length = 640

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
 Frame = -2

Query: 251 FLFNVAHAIFFLRPTKSXGLRICQRICFNY---EYKKMKNNIKP 129
           F F ++ A+FFL+  K     +  R   NY   EYK M N + P
Sbjct: 250 FFFVISWAVFFLQFWKRKNSAVLARWGINYSFSEYKTMGNELDP 293


>01_03_0242 +
           14113721-14113966,14114102-14114260,14114495-14114868,
           14114939-14115419,14115651-14116192,14116253-14116531,
           14116837-14116918,14116994-14117086,14117173-14117367
          Length = 816

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/58 (27%), Positives = 21/58 (36%)
 Frame = +1

Query: 379 VSAPVKITPERMAQEIYDXIKRLHRRGQLRLANXXXXXXXXXXXXXXXXXPPHQSAHG 552
           +S    +   +  QE  D IKRLH+R    + N                 P H  AHG
Sbjct: 640 ISEDSAVLKNKTPQEKNDYIKRLHKRKMAEVGNYLATSFLAHSDKRVIMVPYHFGAHG 697


>10_01_0126 + 1511963-1512052,1513440-1513785,1513884-1515010
          Length = 520

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = +1

Query: 202 DFVGRKKKMAC-ATL----KRNLDWESKAQLPTKRRRCSPFAASPSTSPGLKTSESKPSS 366
           + VG + +  C  T+    K +L  E +A   ++  RC+P ++  ST        S PS 
Sbjct: 83  EIVGEETRKVCNVTMEHLEKSSLSEEHEAPSYSQALRCTPESSLDSTKRLRTEVSSSPSQ 142

Query: 367 FGESVSAPVKITPERMAQE 423
               V+  VK TP    ++
Sbjct: 143 TRNGVNIRVKFTPTNQRRD 161


>09_06_0053 - 20537433-20537833,20537910-20538456
          Length = 315

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +1

Query: 280 PTKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSA 387
           PTKR R  P A +P+TS G +   +    F   VS+
Sbjct: 165 PTKRPRARPSATTPTTSSGDQQMVTVAERFPREVSS 200


>05_03_0375 -
           13244887-13244961,13245084-13245215,13247018-13247110,
           13247196-13247355,13247471-13247580,13248259-13248314,
           13249115-13249880
          Length = 463

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
 Frame = +1

Query: 226 MACATLKRNLDWESKAQLPTKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVKITP 405
           +  AT   +L   S+ QLP   R  S  A +     G+  S  +P     SV A    + 
Sbjct: 13  VTAATFSPSLPLLSRYQLPRAHRAASTVAFAARRFRGVNPSSDRPRGRRASVPAAPTTSA 72

Query: 406 ERM-------AQEIYDXIKRLHRRGQLRL 471
            R           +   + RLHRR +LRL
Sbjct: 73  ARDDGGGGGGIDALEAELWRLHRRAELRL 101


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,456,708
Number of Sequences: 37544
Number of extensions: 338875
Number of successful extensions: 965
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)