Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P10
(651 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC119745-1|AAI19746.1| 192|Homo sapiens chromosome 1 open readi... 53 8e-07
AL606465-2|CAI16710.1| 192|Homo sapiens chromosome 1 open readi... 53 8e-07
AK022728-1|BAB14208.1| 192|Homo sapiens protein ( Homo sapiens ... 53 8e-07
BC005051-1|AAH05051.1| 203|Homo sapiens chromosome 6 open readi... 52 2e-06
BC003042-1|AAH03042.1| 203|Homo sapiens chromosome 6 open readi... 52 2e-06
BC000764-1|AAH00764.1| 203|Homo sapiens chromosome 6 open readi... 52 2e-06
AL133211-3|CAI21541.1| 203|Homo sapiens protein ( Human DNA seq... 52 2e-06
AK222701-1|BAD96421.1| 203|Homo sapiens hypothetical protein FL... 52 2e-06
AK223276-1|BAD96996.1| 192|Homo sapiens hypothetical protein FL... 52 2e-06
AK001204-1|BAA91551.1| 135|Homo sapiens protein ( Homo sapiens ... 38 0.023
BC119746-1|AAI19747.1| 152|Homo sapiens C1orf108 protein protein. 34 0.38
BC087848-1|AAH87848.1| 261|Homo sapiens LGI4 protein protein. 31 3.6
AY358121-1|AAQ88488.1| 261|Homo sapiens LGI4 protein. 31 3.6
AJ487959-1|CAD32306.1| 537|Homo sapiens LGI1-like protein 3 pro... 31 3.6
AJ487519-1|CAD31787.1| 537|Homo sapiens leucine-rich glioma ina... 31 3.6
AF467954-1|AAM49552.1| 537|Homo sapiens LGI4 protein. 31 3.6
>BC119745-1|AAI19746.1| 192|Homo sapiens chromosome 1 open reading
frame 108 protein.
Length = 192
Score = 53.2 bits (122), Expect = 8e-07
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESKAQLP--TKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVK 396
MAC ATLKR +++E+ P KRRRC+P P +PGL+ +++P ++ + P
Sbjct: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPL---PGPTPGLRPPDAEPPPPFQTQTPPQS 57
Query: 397 I-------------TPERMAQEIYDXIKRLHRRGQLRLANXXXXXXXXXXXXXXXXXPPH 537
+ TPE++ Q I R R L +
Sbjct: 58 LQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAP 117
Query: 538 QSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
S + + FT +QV +ICER+L D E +R E
Sbjct: 118 SSPGSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREE 155
>AL606465-2|CAI16710.1| 192|Homo sapiens chromosome 1 open reading
frame 108 protein.
Length = 192
Score = 53.2 bits (122), Expect = 8e-07
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESKAQLP--TKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVK 396
MAC ATLKR +++E+ P KRRRC+P P +PGL+ +++P ++ + P
Sbjct: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPL---PGPTPGLRPPDAEPPPPFQTQTPPQS 57
Query: 397 I-------------TPERMAQEIYDXIKRLHRRGQLRLANXXXXXXXXXXXXXXXXXPPH 537
+ TPE++ Q I R R L +
Sbjct: 58 LQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAP 117
Query: 538 QSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
S + + FT +QV +ICER+L D E +R E
Sbjct: 118 SSPGSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREE 155
>AK022728-1|BAB14208.1| 192|Homo sapiens protein ( Homo sapiens
cDNA FLJ12666 fis, clone NT2RM4002256. ).
Length = 192
Score = 53.2 bits (122), Expect = 8e-07
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 16/158 (10%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESKAQLP--TKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVK 396
MAC ATLKR +++E+ P KRRRC+P P +PGL+ +++P ++ + P
Sbjct: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPL---PGPTPGLRPPDAEPPPPFQTQTPPQS 57
Query: 397 I-------------TPERMAQEIYDXIKRLHRRGQLRLANXXXXXXXXXXXXXXXXXPPH 537
+ TPE++ Q I R R L +
Sbjct: 58 LQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAP 117
Query: 538 QSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
S + + FT +QV +ICER+L D E +R E
Sbjct: 118 SSPGSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREE 155
>BC005051-1|AAH05051.1| 203|Homo sapiens chromosome 6 open reading
frame 166 protein.
Length = 203
Score = 52.0 bits (119), Expect = 2e-06
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESK-AQLPTKRRRCSPFAASPSTSPG-LKTSESKPSSFGESVSAPVK 396
MAC ATLKR LD++ + KRRRC+P +A S + L + + +SF + ++P K
Sbjct: 1 MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQK 60
Query: 397 ---------------ITPERMAQEIYDXIKRLHRRGQLRLANX------XXXXXXXXXXX 513
+T E++ I KR+ +R L +
Sbjct: 61 YLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAFLL 120
Query: 514 XXXXXPPHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
P SA + + LFT +QV MICER+L ++E +R E
Sbjct: 121 SGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREE 166
>BC003042-1|AAH03042.1| 203|Homo sapiens chromosome 6 open reading
frame 166 protein.
Length = 203
Score = 52.0 bits (119), Expect = 2e-06
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESK-AQLPTKRRRCSPFAASPSTSPG-LKTSESKPSSFGESVSAPVK 396
MAC ATLKR LD++ + KRRRC+P +A S + L + + +SF + ++P K
Sbjct: 1 MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQK 60
Query: 397 ---------------ITPERMAQEIYDXIKRLHRRGQLRLANX------XXXXXXXXXXX 513
+T E++ I KR+ +R L +
Sbjct: 61 YLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAFLL 120
Query: 514 XXXXXPPHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
P SA + + LFT +QV MICER+L ++E +R E
Sbjct: 121 SGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREE 166
>BC000764-1|AAH00764.1| 203|Homo sapiens chromosome 6 open reading
frame 166 protein.
Length = 203
Score = 52.0 bits (119), Expect = 2e-06
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESK-AQLPTKRRRCSPFAASPSTSPG-LKTSESKPSSFGESVSAPVK 396
MAC ATLKR LD++ + KRRRC+P +A S + L + + +SF + ++P K
Sbjct: 1 MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQK 60
Query: 397 ---------------ITPERMAQEIYDXIKRLHRRGQLRLANX------XXXXXXXXXXX 513
+T E++ I KR+ +R L +
Sbjct: 61 YLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAFLL 120
Query: 514 XXXXXPPHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
P SA + + LFT +QV MICER+L ++E +R E
Sbjct: 121 SGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREE 166
>AL133211-3|CAI21541.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP3-486L4 on chromosome 6q14.3-16.1
Contains the 3' end of the ORC3L gene for origin
recognition ).
Length = 203
Score = 52.0 bits (119), Expect = 2e-06
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESK-AQLPTKRRRCSPFAASPSTSPG-LKTSESKPSSFGESVSAPVK 396
MAC ATLKR LD++ + KRRRC+P +A S + L + + +SF + ++P K
Sbjct: 1 MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQK 60
Query: 397 ---------------ITPERMAQEIYDXIKRLHRRGQLRLANX------XXXXXXXXXXX 513
+T E++ I KR+ +R L +
Sbjct: 61 YLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAFLL 120
Query: 514 XXXXXPPHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
P SA + + LFT +QV MICER+L ++E +R E
Sbjct: 121 SGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREE 166
>AK222701-1|BAD96421.1| 203|Homo sapiens hypothetical protein
FLJ10342 variant protein.
Length = 203
Score = 52.0 bits (119), Expect = 2e-06
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESK-AQLPTKRRRCSPFAASPSTSPG-LKTSESKPSSFGESVSAPVK 396
MAC ATLKR LD++ + KRRRC+P +A S + L + + +SF + ++P K
Sbjct: 1 MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQK 60
Query: 397 ---------------ITPERMAQEIYDXIKRLHRRGQLRLANX------XXXXXXXXXXX 513
+T E++ I KR+ +R L +
Sbjct: 61 YLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAFLL 120
Query: 514 XXXXXPPHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
P SA + + LFT +QV MICER+L ++E +R E
Sbjct: 121 SGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREE 166
>AK223276-1|BAD96996.1| 192|Homo sapiens hypothetical protein
FLJ12666 variant protein.
Length = 192
Score = 51.6 bits (118), Expect = 2e-06
Identities = 44/158 (27%), Positives = 66/158 (41%), Gaps = 16/158 (10%)
Frame = +1
Query: 226 MAC-ATLKRNLDWESKAQLP--TKRRRCSPFAASPSTSPGLKTSESKPSSFGESVSAPVK 396
MAC ATLKR +++E+ P KRRRC+P P +PGL +++P ++ + P
Sbjct: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPL---PGPTPGLGPPDAEPPPPFQTQTPPQS 57
Query: 397 I-------------TPERMAQEIYDXIKRLHRRGQLRLANXXXXXXXXXXXXXXXXXPPH 537
+ TPE++ Q I R R L +
Sbjct: 58 LQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAP 117
Query: 538 QSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAE 651
S + + FT +QV +ICER+L D E +R E
Sbjct: 118 SSPGSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREE 155
>AK001204-1|BAA91551.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ10342 fis, clone NT2RM2000837. ).
Length = 135
Score = 38.3 bits (85), Expect = 0.023
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Frame = +1
Query: 226 MAC-ATLKRNLDWES-KAQLPTKRRRCSPFAA--SPSTSPGLKTSESKPSSFGESVSAPV 393
MAC ATLKR LD++ + KRRRC+P +A S + SP L + + +SF + ++P
Sbjct: 1 MACGATLKRTLDFDPLLSPASPKRRRCAPLSAPTSAAASP-LSAAAATAASFSAAAASPQ 59
Query: 394 K 396
K
Sbjct: 60 K 60
>BC119746-1|AAI19747.1| 152|Homo sapiens C1orf108 protein protein.
Length = 152
Score = 34.3 bits (75), Expect = 0.38
Identities = 22/84 (26%), Positives = 31/84 (36%)
Frame = +1
Query: 400 TPERMAQEIYDXIKRLHRRGQLRLANXXXXXXXXXXXXXXXXXPPHQSAHGPQRARTRAL 579
TPE++ Q I R R L + S + +
Sbjct: 32 TPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSPGSSWMKKDQPT 91
Query: 580 FTFKQVRMICERMLHDQEVALRAE 651
FT +QV +ICER+L D E +R E
Sbjct: 92 FTLRQVGIICERLLKDYEDKIREE 115
>BC087848-1|AAH87848.1| 261|Homo sapiens LGI4 protein protein.
Length = 261
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 413 WHKRFMMXLNDCIDVDSCAWPTALLHHAHHQVDPK 517
W ++M +N + +CA P +L H H +DPK
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPK 202
>AY358121-1|AAQ88488.1| 261|Homo sapiens LGI4 protein.
Length = 261
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 413 WHKRFMMXLNDCIDVDSCAWPTALLHHAHHQVDPK 517
W ++M +N + +CA P +L H H +DPK
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPK 202
>AJ487959-1|CAD32306.1| 537|Homo sapiens LGI1-like protein 3
protein.
Length = 537
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 413 WHKRFMMXLNDCIDVDSCAWPTALLHHAHHQVDPK 517
W ++M +N + +CA P +L H H +DPK
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPK 202
>AJ487519-1|CAD31787.1| 537|Homo sapiens leucine-rich glioma
inactivated protein 4 protein.
Length = 537
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 413 WHKRFMMXLNDCIDVDSCAWPTALLHHAHHQVDPK 517
W ++M +N + +CA P +L H H +DPK
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPK 202
>AF467954-1|AAM49552.1| 537|Homo sapiens LGI4 protein.
Length = 537
Score = 31.1 bits (67), Expect = 3.6
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 413 WHKRFMMXLNDCIDVDSCAWPTALLHHAHHQVDPK 517
W ++M +N + +CA P +L H H +DPK
Sbjct: 168 WLLQWMPTVNASVGTGACAGPASLSHMQLHHLDPK 202
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,229,633
Number of Sequences: 237096
Number of extensions: 1864641
Number of successful extensions: 4420
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4406
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -