BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P07
(437 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein. 23 4.8
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi... 23 6.3
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 22 8.3
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 22 8.3
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 22 8.3
>AY534995-1|AAT07393.1| 461|Anopheles gambiae XK-related protein.
Length = 461
Score = 23.0 bits (47), Expect = 4.8
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +1
Query: 118 LCIIIVLFCC 147
LC+++V FCC
Sbjct: 179 LCVVVVPFCC 188
>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
protein I protein.
Length = 1340
Score = 22.6 bits (46), Expect = 6.3
Identities = 7/25 (28%), Positives = 16/25 (64%)
Frame = -1
Query: 212 KILHQMQMNAINFRPKSMLIFKQQN 138
++++Q +N +NF + L ++QN
Sbjct: 1181 EVIYQFDLNLVNFEHRFKLDLEKQN 1205
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 22.2 bits (45), Expect = 8.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 207 SSSNANECNKFSTKVNVNIQTTKQNDN 127
SS+N+N N S+ N N ++ N+N
Sbjct: 196 SSNNSNNNNNSSSNNNNNTISSNNNNN 222
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 22.2 bits (45), Expect = 8.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 207 SSSNANECNKFSTKVNVNIQTTKQNDN 127
SS+N+N N S+ N N ++ N+N
Sbjct: 196 SSNNSNNNNNSSSNNNNNTISSNNNNN 222
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 22.2 bits (45), Expect = 8.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 207 SSSNANECNKFSTKVNVNIQTTKQNDN 127
SS+N+N N S+ N N ++ N+N
Sbjct: 148 SSNNSNNNNNSSSNNNNNTISSNNNNN 174
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 323,827
Number of Sequences: 2352
Number of extensions: 5264
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36568146
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -