Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P07
(437 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 22 3.4
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 22 3.4
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 22 3.4
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 22 3.4
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 21 7.9
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 84 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 127
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 360
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.8 bits (44), Expect = 3.4
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 13 DSKAMDNNYNLTQRLQLD*FHKYYNGCYFN-ETI*QLCIIIVLFC 144
++ ++ NNYN H YN Y+N I Q+ I + ++C
Sbjct: 317 NNNSLSNNYNYNNNYNNYNKHN-YNKLYYNINYIEQIPIPVPVYC 360
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 20.6 bits (41), Expect = 7.9
Identities = 6/19 (31%), Positives = 12/19 (63%)
Frame = -3
Query: 129 NYTQLLDCFVEITAVIIFM 73
+Y + +D F+ + V +FM
Sbjct: 302 SYLKAVDAFMSVCTVFVFM 320
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,396
Number of Sequences: 438
Number of extensions: 1815
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11327868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
- SilkBase 1999-2023 -