BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P04
(626 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J03251-1|AAA28714.1| 846|Drosophila melanogaster myospheroid pr... 106 2e-23
AY113499-1|AAM29504.1| 846|Drosophila melanogaster RE55238p pro... 106 2e-23
AE014298-1112|AAF46313.2| 846|Drosophila melanogaster CG1560-PA... 106 2e-23
L13305-1|AAC37169.1| 799|Drosophila melanogaster integrin beta ... 79 4e-15
AE014134-3326|AAF53952.1| 799|Drosophila melanogaster CG1762-PA... 79 4e-15
BT029148-1|ABJ17082.1| 311|Drosophila melanogaster RT01042p pro... 33 0.32
BT028868-1|ABI34249.2| 311|Drosophila melanogaster RT01159p pro... 33 0.32
BT028862-1|ABI34243.2| 311|Drosophila melanogaster RT01142p pro... 33 0.32
BT028835-1|ABI34216.2| 311|Drosophila melanogaster RT01059p pro... 33 0.32
AE014298-678|AAF45983.1| 311|Drosophila melanogaster CG2932-PA ... 33 0.32
AF095579-1|AAC64185.1| 100|Drosophila melanogaster BTEB2-like z... 30 2.2
>J03251-1|AAA28714.1| 846|Drosophila melanogaster myospheroid
protein protein.
Length = 846
Score = 106 bits (255), Expect = 2e-23
Identities = 46/82 (56%), Positives = 66/82 (80%)
Frame = +3
Query: 381 LVQMXPQXVKLXMRMNQMQKLTFAYSRAQDYPVDLYYLMDLSRSMKNDKEKLSALGSLLS 560
+VQ+ PQ ++L +R+N+ + +YS+A+ YPVDLYYLMDLS+SM++DK KLS LG LS
Sbjct: 153 IVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSMEDDKAKLSTLGDKLS 212
Query: 561 ATMRNMTSNFXIGFGSFVDKLV 626
TM+ +T+NF +GFGSFVDK++
Sbjct: 213 ETMKRITNNFHLGFGSFVDKVL 234
>AY113499-1|AAM29504.1| 846|Drosophila melanogaster RE55238p
protein.
Length = 846
Score = 106 bits (255), Expect = 2e-23
Identities = 46/82 (56%), Positives = 66/82 (80%)
Frame = +3
Query: 381 LVQMXPQXVKLXMRMNQMQKLTFAYSRAQDYPVDLYYLMDLSRSMKNDKEKLSALGSLLS 560
+VQ+ PQ ++L +R+N+ + +YS+A+ YPVDLYYLMDLS+SM++DK KLS LG LS
Sbjct: 153 IVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSMEDDKAKLSTLGDKLS 212
Query: 561 ATMRNMTSNFXIGFGSFVDKLV 626
TM+ +T+NF +GFGSFVDK++
Sbjct: 213 ETMKRITNNFHLGFGSFVDKVL 234
>AE014298-1112|AAF46313.2| 846|Drosophila melanogaster CG1560-PA
protein.
Length = 846
Score = 106 bits (255), Expect = 2e-23
Identities = 46/82 (56%), Positives = 66/82 (80%)
Frame = +3
Query: 381 LVQMXPQXVKLXMRMNQMQKLTFAYSRAQDYPVDLYYLMDLSRSMKNDKEKLSALGSLLS 560
+VQ+ PQ ++L +R+N+ + +YS+A+ YPVDLYYLMDLS+SM++DK KLS LG LS
Sbjct: 153 IVQIQPQSMRLALRVNEKHNIKISYSQAEGYPVDLYYLMDLSKSMEDDKAKLSTLGDKLS 212
Query: 561 ATMRNMTSNFXIGFGSFVDKLV 626
TM+ +T+NF +GFGSFVDK++
Sbjct: 213 ETMKRITNNFHLGFGSFVDKVL 234
>L13305-1|AAC37169.1| 799|Drosophila melanogaster integrin beta
subunit protein.
Length = 799
Score = 79.4 bits (187), Expect = 4e-15
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +3
Query: 384 VQMXPQXVKLXMRMNQMQKLTFAYSRAQDYPVDLYYLMDLSRSMKNDKEKLSALGSLLSA 563
VQ+ PQ L + Q++ +Y A++ P+DLY LMDL+ +M++DK+ L LG+ LS
Sbjct: 104 VQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQ 163
Query: 564 TMRNMTSNFXIGFGSFVDK 620
T++N+T N+ +GFGSF DK
Sbjct: 164 TLKNLTGNYRLGFGSFADK 182
>AE014134-3326|AAF53952.1| 799|Drosophila melanogaster CG1762-PA
protein.
Length = 799
Score = 79.4 bits (187), Expect = 4e-15
Identities = 35/79 (44%), Positives = 54/79 (68%)
Frame = +3
Query: 384 VQMXPQXVKLXMRMNQMQKLTFAYSRAQDYPVDLYYLMDLSRSMKNDKEKLSALGSLLSA 563
VQ+ PQ L + Q++ +Y A++ P+DLY LMDL+ +M++DK+ L LG+ LS
Sbjct: 104 VQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEELGAQLSQ 163
Query: 564 TMRNMTSNFXIGFGSFVDK 620
T++N+T N+ +GFGSF DK
Sbjct: 164 TLKNLTGNYRLGFGSFADK 182
>BT029148-1|ABJ17082.1| 311|Drosophila melanogaster RT01042p
protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 350 CRWCSWCWRESRTNEXPXSEATXENESNAKAYVCLFPGSRLSRRSVLSYGSQ*VHEERQR 529
C W WR SR++E + + S K Y C + +R L+ + VHE R
Sbjct: 229 CSWPDCVWRFSRSDELARHK---RSHSGVKPYKCDYCSKCFARSDHLTKHRK-VHERRLL 284
Query: 530 EAQCFGQSALGDD 568
A G+S + DD
Sbjct: 285 AASRAGRSLISDD 297
>BT028868-1|ABI34249.2| 311|Drosophila melanogaster RT01159p
protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 350 CRWCSWCWRESRTNEXPXSEATXENESNAKAYVCLFPGSRLSRRSVLSYGSQ*VHEERQR 529
C W WR SR++E + + S K Y C + +R L+ + VHE R
Sbjct: 229 CSWPDCVWRFSRSDELARHK---RSHSGVKPYKCDYCSKCFARSDHLTKHRK-VHERRLL 284
Query: 530 EAQCFGQSALGDD 568
A G+S + DD
Sbjct: 285 AASRAGRSLISDD 297
>BT028862-1|ABI34243.2| 311|Drosophila melanogaster RT01142p
protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 350 CRWCSWCWRESRTNEXPXSEATXENESNAKAYVCLFPGSRLSRRSVLSYGSQ*VHEERQR 529
C W WR SR++E + + S K Y C + +R L+ + VHE R
Sbjct: 229 CSWPDCVWRFSRSDELARHK---RSHSGVKPYKCDYCSKCFARSDHLTKHRK-VHERRLL 284
Query: 530 EAQCFGQSALGDD 568
A G+S + DD
Sbjct: 285 AASRAGRSLISDD 297
>BT028835-1|ABI34216.2| 311|Drosophila melanogaster RT01059p
protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 350 CRWCSWCWRESRTNEXPXSEATXENESNAKAYVCLFPGSRLSRRSVLSYGSQ*VHEERQR 529
C W WR SR++E + + S K Y C + +R L+ + VHE R
Sbjct: 229 CSWPDCVWRFSRSDELARHK---RSHSGVKPYKCDYCSKCFARSDHLTKHRK-VHERRLL 284
Query: 530 EAQCFGQSALGDD 568
A G+S + DD
Sbjct: 285 AASRAGRSLISDD 297
>AE014298-678|AAF45983.1| 311|Drosophila melanogaster CG2932-PA
protein.
Length = 311
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = +2
Query: 350 CRWCSWCWRESRTNEXPXSEATXENESNAKAYVCLFPGSRLSRRSVLSYGSQ*VHEERQR 529
C W WR SR++E + + S K Y C + +R L+ + VHE R
Sbjct: 229 CSWPDCVWRFSRSDELARHK---RSHSGVKPYKCDYCSKCFARSDHLTKHRK-VHERRLL 284
Query: 530 EAQCFGQSALGDD 568
A G+S + DD
Sbjct: 285 AASRAGRSLISDD 297
>AF095579-1|AAC64185.1| 100|Drosophila melanogaster BTEB2-like zinc
finger protein protein.
Length = 100
Score = 30.3 bits (65), Expect = 2.2
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = +2
Query: 350 CRWCSWCWRESRTNEXPXSEATXENESNAKAYVCLFPGSRLSRRSVLSYGSQ*VHEERQR 529
C W WR SR++E + + S K Y C + +R L+ + VHE
Sbjct: 9 CSWPDCVWRFSRSDELARHK---RSHSGVKPYKCDYCSKCFARSDHLTKHRK-VHERGLL 64
Query: 530 EAQCFGQSALGDD 568
A G+S + DD
Sbjct: 65 AASRAGRSLISDD 77
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,677,259
Number of Sequences: 53049
Number of extensions: 473238
Number of successful extensions: 1578
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2600432100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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