Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P03
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM065... 106 4e-22
UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16; Ne... 105 9e-22
UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like prot... 66 5e-10
UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 63 6e-09
UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1; B... 59 1e-07
UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1; B... 58 2e-07
UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl p... 54 3e-06
UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 51 3e-05
UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza sat... 45 0.001
UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Re... 45 0.001
UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3; Dic... 45 0.001
UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1, mi... 44 0.003
UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6; Magnolio... 43 0.006
UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP ... 43 0.006
UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase, chl... 43 0.007
UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5; Dik... 38 0.28
UniRef50_A7QAL2 Cluster: Chromosome chr5 scaffold_72, whole geno... 36 1.1
UniRef50_A7ARL2 Cluster: Regulator of ribosome biosynthesis, put... 35 1.5
UniRef50_Q82LA2 Cluster: Putative beta-xylosidase, secreted; n=1... 35 2.0
UniRef50_Q8GRF3 Cluster: Chromopyrrolic acid synthase StaD; n=2;... 35 2.0
UniRef50_A6DJA8 Cluster: GTP-binding protein; n=2; Lentisphaerae... 35 2.0
UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putati... 35 2.0
UniRef50_Q8KHV6 Cluster: VioB; n=2; Actinomycetales|Rep: VioB - ... 34 2.6
UniRef50_A7A6R2 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q1YML2 Cluster: Possible glucose--fructose oxidoreducta... 34 3.4
UniRef50_A6R1I2 Cluster: Anucleate primary sterigmata protein B;... 34 3.4
UniRef50_Q9SAK1 Cluster: T8K14.10; n=2; Arabidopsis thaliana|Rep... 33 4.5
UniRef50_Q64CV3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_Q2J910 Cluster: Serine/threonine protein kinase; n=1; F... 33 6.0
UniRef50_Q0BRS1 Cluster: Large terminase subunit; n=1; Granuliba... 33 6.0
UniRef50_Q5AR83 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_O94326 Cluster: Transcription factor; n=1; Schizosaccha... 33 6.0
>UniRef50_Q7KN61 Cluster: GM06581p; n=6; Endopterygota|Rep: GM06581p
- Drosophila melanogaster (Fruit fly)
Length = 419
Score = 106 bits (255), Expect = 4e-22
Identities = 51/93 (54%), Positives = 68/93 (73%)
Frame = +2
Query: 335 KLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKW 514
KL+K R LSTL +P+A R + VSKD+SR+FMAVFPD+VRD+T K + +A+KW
Sbjct: 55 KLKKTSRTLSTLQNHSVPIAAR-VTVSKDESRDFMAVFPDLVRDITTVTKAYNCSDAAKW 113
Query: 515 LAKLLQYNVPNGKKNRGLATILAYKMLXKKENL 613
A++LQYNVP GKKNRG+ T+L YK L ++L
Sbjct: 114 FAQVLQYNVPRGKKNRGILTVLTYKNLVPTQDL 146
>UniRef50_Q56CY8 Cluster: Farnesyl diphosphate synthase; n=16;
Neoptera|Rep: Farnesyl diphosphate synthase - Anthonomus
grandis (Boll weevil)
Length = 438
Score = 105 bits (252), Expect = 9e-22
Identities = 62/144 (43%), Positives = 94/144 (65%), Gaps = 11/144 (7%)
Frame = +2
Query: 215 VRRHISKTTSVTNSDAMAPRLDQSASKS-----PQAE---ETGPKRLLKLQKYH--RFLS 364
+RR I+KT++ +NSDA++ D + + P ++ KR K +++ R LS
Sbjct: 19 IRRGITKTSTDSNSDAISRAQDHNQMNNFNLEGPSSQYHTNVNNKRWHKQMQFNNLRALS 78
Query: 365 TLTPQEMPMATRGLA-VSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNV 541
T+ Q +P + VSK+QSR+FMA+FPD+VR+LTE G++ ++P+ + +A++LQYNV
Sbjct: 79 TIQ-QTIPKPSHSSTLVSKEQSRDFMALFPDLVRELTELGRNPELPDVMRRVARVLQYNV 137
Query: 542 PNGKKNRGLATILAYKMLXKKENL 613
PNGKKNRGL I AYKML +NL
Sbjct: 138 PNGKKNRGLILISAYKMLEDPKNL 161
>UniRef50_Q1XAB1 Cluster: Farnesyl diphosphate synthase-like
protein; n=2; Choristoneura fumiferana|Rep: Farnesyl
diphosphate synthase-like protein - Choristoneura
fumiferana (Spruce budworm)
Length = 397
Score = 66.5 bits (155), Expect = 5e-10
Identities = 32/87 (36%), Positives = 49/87 (56%)
Frame = +2
Query: 389 MATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGL 568
M+T+ + ++ + F V P I+ +T + +VPE + WL K+L+YN+ GKK RGL
Sbjct: 48 MSTKA-SPTQTKKESFEDVLPSILNTITTNSELTEVPEVANWLKKVLEYNLAGGKKARGL 106
Query: 569 ATILAYKMLXKKENLXAREHSACKRYG 649
T+ AY+ML K EN+ K G
Sbjct: 107 TTLFAYEMLEKPENITEETIYLAKTLG 133
>UniRef50_P08836 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=16;
Fungi/Metazoa group|Rep: Farnesyl pyrophosphate
synthetase (FPP synthetase) (FPS) (Farnesyl diphosphate
synthetase) [Includes: Dimethylallyltranstransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)] -
Gallus gallus (Chicken)
Length = 367
Score = 62.9 bits (146), Expect = 6e-09
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Frame = +2
Query: 350 HRFLSTLTPQEMPMATRGLA--VSKDQSREFMAVFPDIVRDLTETG-KHIDVPEASKWLA 520
H+F + P A R L+ V + + EF+ FP IVRDLTE G H +V +A L
Sbjct: 2 HKFTGVNAKFQQP-ALRNLSPVVVEREREEFVGFFPQIVRDLTEDGIGHPEVGDAVARLK 60
Query: 521 KLLQYNVPNGKKNRGLATILAYKML 595
++LQYN P GK NRGL + AY+ L
Sbjct: 61 EVLQYNAPGGKCNRGLTVVAAYREL 85
>UniRef50_A5A7A6 Cluster: Farnesyl diphosphate synthase 3; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 3 -
Bombyx mori (Silk moth)
Length = 385
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/60 (41%), Positives = 37/60 (61%)
Frame = +2
Query: 434 FMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLXKKENL 613
F + I+ +LT K +PE W+ K+L+YNV GKK RG+ T+LAY++ K EN+
Sbjct: 50 FQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENV 109
>UniRef50_A5A7A5 Cluster: Farnesyl diphosphate synthase 2; n=1;
Bombyx mori|Rep: Farnesyl diphosphate synthase 2 -
Bombyx mori (Silk moth)
Length = 382
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +2
Query: 383 MPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNR 562
M A++ L + ++ + F + P+++ L K +VP+ WL K+L YN+ GK R
Sbjct: 31 MTTASKNLEIINEK-KMFDDLLPEVIMTLQNKSKLSEVPQIGDWLKKMLHYNLVGGKHTR 89
Query: 563 GLATILAYKMLXKKENLXAREHS---ACK 640
G+ T+++YK + K E + EH+ ACK
Sbjct: 90 GITTVISYKTIEKPEKVT--EHTLKMACK 116
>UniRef50_UPI0000DB7C0D Cluster: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial; n=7; Apis
mellifera|Rep: PREDICTED: similar to Farnesyl
pyrophosphate synthase CG12389-PA, partial - Apis
mellifera
Length = 545
Score = 54.0 bits (124), Expect = 3e-06
Identities = 22/65 (33%), Positives = 42/65 (64%)
Frame = +2
Query: 419 DQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKMLX 598
D+ + M V+P+IV +LT+ ++ + +KW+ ++L+YNVP G K R ++ ++A K+L
Sbjct: 225 DERNKLMTVWPNIVNELTKDNNE-ELLDVNKWITEVLEYNVPKGGKRRSVSFVIACKLLT 283
Query: 599 KKENL 613
+ L
Sbjct: 284 SQNQL 288
>UniRef50_P08524 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=32; Fungi|Rep:
Farnesyl pyrophosphate synthetase (FPP synthetase) (FPS)
(Farnesyl diphosphate synthetase) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Saccharomyces
cerevisiae (Baker's yeast)
Length = 352
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Frame = +2
Query: 404 LAVSKDQSRE-FMAVFPDIVRDLTETGKHIDVP-EASKWLAKLLQYNVPNGKKNRGLATI 577
+A K+ RE F+ VFP +V +L + +P EA W A L YN P GK NRGL+ +
Sbjct: 1 MASEKEIRRERFLNVFPKLVEELNASLLAYGMPKEACDWYAHSLNYNTPGGKLNRGLSVV 60
Query: 578 LAYKMLXKK--ENLXAREH 628
Y +L K E L E+
Sbjct: 61 DTYAILSNKTVEQLGQEEY 79
>UniRef50_A5DDW6 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 388
Score = 48.4 bits (110), Expect = 1e-04
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Frame = +2
Query: 404 LAVSKDQSRE-FMAVFPDIVRDLTETGKHIDVPE-ASKWLAKLLQYNVPNGKKNRGLATI 577
+++ KD +R+ F+ F + DL + K +PE A KW + YNVP GK NRGL+ +
Sbjct: 38 VSMDKDATRKVFLNEFEPLREDLLDVIKLYSMPEEAIKWFSDSFSYNVPGGKLNRGLSVV 97
Query: 578 LAYKMLXKKE 607
Y +L K+
Sbjct: 98 DTYAILKGKK 107
>UniRef50_Q01KM5 Cluster: OSIGBa0158D24.4 protein; n=4; Oryza
sativa|Rep: OSIGBa0158D24.4 protein - Oryza sativa
(Rice)
Length = 392
Score = 45.2 bits (102), Expect = 0.001
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 419 DQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKML 595
D F+ + + DL EA +WLA+++ YNVP GK NRGL+ I +Y +L
Sbjct: 53 DARERFVQAYGRLRDDLVGDDSCELTDEARRWLAQMIDYNVPGGKLNRGLSVIDSYLLL 111
>UniRef50_A4RUB9 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 348
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +2
Query: 404 LAVSKDQSREFMAVFPDIVRDLTETG-KHIDVPEASKWLAKLLQYNVPNGKKNRGLATIL 580
+ D FMAVF ++ L V A +W+ +++ YNVP+GK NRGLA +
Sbjct: 1 MGAKDDDKTRFMAVFRELADGLVRDEIDDRQVKIAVEWIKRMIDYNVPHGKLNRGLAVVD 60
Query: 581 AYKMLXKKEN 610
+ L +N
Sbjct: 61 GVRALKAAKN 70
>UniRef50_Q54XP0 Cluster: Farnesyl diphosphate synthase; n=3;
Dictyostelium discoideum|Rep: Farnesyl diphosphate
synthase - Dictyostelium discoideum AX4
Length = 382
Score = 45.2 bits (102), Expect = 0.001
Identities = 21/90 (23%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 359 LSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDV-PEASKWLAKLLQY 535
L+ + M + + +K++ +F+ +FP + ++ + +D+ P+ W+ K++
Sbjct: 16 LAPTSELNMNQTSAPIKTAKEELADFVEIFPILTNEILKELPGMDMPPQTIAWVEKMINV 75
Query: 536 NVPNGKKNRGLATILAYKMLXKKENLXARE 625
NV GK NRGL + + ++L + L E
Sbjct: 76 NVSGGKMNRGLTVLHSLQLLVEGRQLSRSE 105
>UniRef50_Q09152 Cluster: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=61;
Spermatophyta|Rep: Farnesyl pyrophosphate synthetase 1,
mitochondrial precursor (FPP synthetase 1) (FPS 1)
(Farnesyl diphosphate synthetase 1) [Includes:
Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Arabidopsis
thaliana (Mouse-ear cress)
Length = 384
Score = 44.0 bits (99), Expect = 0.003
Identities = 24/96 (25%), Positives = 45/96 (46%)
Frame = +2
Query: 338 LQKYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWL 517
+ +H L +L + ++ D F+ V+ + DL E+ W+
Sbjct: 18 IPSHHLHLRSLGGSLYRRRIQSSSMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWV 77
Query: 518 AKLLQYNVPNGKKNRGLATILAYKMLXKKENLXARE 625
++L YNV GK NRGL+ + ++K+L + +L +E
Sbjct: 78 DRMLDYNVRGGKLNRGLSVVDSFKLLKQGNDLTEQE 113
>UniRef50_Q7FAL6 Cluster: OSJNBa0071I13.18 protein; n=6;
Magnoliophyta|Rep: OSJNBa0071I13.18 protein - Oryza
sativa subsp. japonica (Rice)
Length = 407
Score = 43.2 bits (97), Expect = 0.006
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +2
Query: 500 EASKWLAKLLQYNVPNGKKNRGLATILAYKML 595
E +W+AK++ YNVP GK NRGL+ + +Y +L
Sbjct: 95 ETRQWVAKMMDYNVPGGKLNRGLSVVDSYMLL 126
>UniRef50_P14324 Cluster: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)]; n=44;
Eukaryota|Rep: Farnesyl pyrophosphate synthetase (FPP
synthetase) (FPS) (Farnesyl diphosphate synthetase)
[Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] - Homo sapiens
(Human)
Length = 353
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 410 VSKDQSREFMAVFPDIVRDLTETGK-HIDVPEASKWLAKLLQYNVPNGKKNRGLATILAY 586
V + ++F+ F IVR LTE H ++ +A L ++L+YN GK NRGL ++A+
Sbjct: 9 VYAQEKQDFVQHFSQIVRVLTEDEMGHPEIGDAIARLKEVLEYNAIGGKYNRGLTVVVAF 68
Query: 587 KML 595
+ L
Sbjct: 69 REL 71
>UniRef50_P0C565 Cluster: Chrysanthemyl diphosphate synthase,
chloroplast precursor; n=2; Anthemideae|Rep:
Chrysanthemyl diphosphate synthase, chloroplast
precursor - Tanacetum cinerariifolium (Dalmatian daisy)
(Chrysanthemumcinerariifolium)
Length = 395
Score = 42.7 bits (96), Expect = 0.007
Identities = 25/98 (25%), Positives = 48/98 (48%)
Frame = +2
Query: 344 KYHRFLSTLTPQEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAK 523
+YH+ S L+ P+ T +S + +FM V+ + +L ++ +W+ +
Sbjct: 37 RYHKPTSELSYS--PLTT---TLSSNLDSQFMQVYETLKSELIHDPSFEFDDDSRQWVER 91
Query: 524 LLQYNVPNGKKNRGLATILAYKMLXKKENLXAREHSAC 637
++ YNVP GK RG + + +Y++L +E AC
Sbjct: 92 MIDYNVPGGKMVRGYSVVDSYQLLKGEELTEDEAFLAC 129
>UniRef50_Q75ND9 Cluster: Farnesyl diphosphate synthase; n=5;
Dikarya|Rep: Farnesyl diphosphate synthase - Lactarius
chrysorrheus (Yellowdrop milkcap) (Agaricus theiogalus)
Length = 381
Score = 37.5 bits (83), Expect = 0.28
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +2
Query: 428 REFMAVFPDIVRDLTETGKHIDVPE-ASKWLAKLLQYNVPNGKKNRGLATILAYKMLXKK 604
+ F V+ + DL E + ++PE A ++ + + YNVP GK NRG++ + + +L +
Sbjct: 29 KRFEGVYAVVRDDLLEDFRKHNMPEEAIEYYQRSMDYNVPGGKLNRGMSVVDSVAILKGR 88
Query: 605 E 607
E
Sbjct: 89 E 89
>UniRef50_A7QAL2 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 663
Score = 35.5 bits (78), Expect = 1.1
Identities = 29/106 (27%), Positives = 51/106 (48%)
Frame = +2
Query: 209 NEVRRHISKTTSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLTPQEMP 388
N + HI+ + +SDA P + SK P ++ RL ++ TP+
Sbjct: 305 NNISHHINSEIEMVHSDANEPVV---RSKDPGYKKEMVNRL-RISDVPE-----TPKLNA 355
Query: 389 MATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKL 526
++G AVS+D+ E++ IV D+ T H++ E +K LA++
Sbjct: 356 TTSQGEAVSEDRVSEWLWTLHRIVVDVVRTDSHLEFYEDTKNLARM 401
>UniRef50_A7ARL2 Cluster: Regulator of ribosome biosynthesis,
putative; n=1; Babesia bovis|Rep: Regulator of ribosome
biosynthesis, putative - Babesia bovis
Length = 238
Score = 35.1 bits (77), Expect = 1.5
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 393 LPEDWPFPRTSPGSSWLSFRTSSGISLRLASTLMFRKPANGWL 521
+P +P P+ P + W F + GI S L+F K N W+
Sbjct: 76 MPRMYPLPKPKPKTRWQIFAEARGIKKHKRSRLVFDKSVNDWV 118
>UniRef50_Q82LA2 Cluster: Putative beta-xylosidase, secreted; n=1;
Streptomyces avermitilis|Rep: Putative beta-xylosidase,
secreted - Streptomyces avermitilis
Length = 464
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = -1
Query: 510 LLASGTSMCLPVSVRSLTMSGKTAMNSRDWSLETASPRVAI 388
L+ G+S+CL +V ++T TA S+ WSL T+ V++
Sbjct: 385 LMGRGSSLCLTENVTAVTQENCTAATSQQWSLTTSGGYVSL 425
>UniRef50_Q8GRF3 Cluster: Chromopyrrolic acid synthase StaD; n=2;
Actinomycetales|Rep: Chromopyrrolic acid synthase StaD -
Streptomyces sp. TP-A0274
Length = 1096
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -3
Query: 514 PFAGFRNINVLASLSEIPDDVRKDSHELPGLVL-GNGQSSGSHRHFLR 374
P A + + ASLSE+ D+R+ +PGL L G+ G H FLR
Sbjct: 825 PPAAYDERHPYASLSELYADIREGLESIPGLFLVDKGRGGGEHHLFLR 872
>UniRef50_A6DJA8 Cluster: GTP-binding protein; n=2;
Lentisphaerae|Rep: GTP-binding protein - Lentisphaera
araneosa HTCC2155
Length = 391
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -3
Query: 502 FRNINVLASLSEIPDDVRKDSHELPGLVLGNGQSSGSHRHFLRSQGRQESVIFL 341
F +N + + PD R ++PGLV G ++ G HFLR R +++++
Sbjct: 191 FTTLNPIVGTIDFPDFTRITIADIPGLVEGAHENIGLGHHFLRHIERTNNLVYV 244
>UniRef50_A5K4U6 Cluster: Farnesyl pyrophosphate synthase, putative;
n=7; Plasmodium|Rep: Farnesyl pyrophosphate synthase,
putative - Plasmodium vivax
Length = 375
Score = 34.7 bits (76), Expect = 2.0
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +2
Query: 392 ATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPE-ASKWLAKLLQYNVPNGKKNRGL 568
A GLA ++ ++ F + L E ++ E SK+ L YN GK NRG+
Sbjct: 9 ADSGLAFFRNMYDKYRDAF---LSHLNEYSLEEEIKEHISKYYKLLFDYNCLGGKNNRGI 65
Query: 569 ATILAYKMLXKKE-NLXAREHSAC 637
IL Y+ + ++ N E +AC
Sbjct: 66 LVILIYEYVKNRDINSSEWEKAAC 89
>UniRef50_Q8KHV6 Cluster: VioB; n=2; Actinomycetales|Rep: VioB -
Nocardia aerocolonigenes (Lechevalieria aerocolonigenes)
Length = 1013
Score = 34.3 bits (75), Expect = 2.6
Identities = 33/99 (33%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Frame = -3
Query: 481 ASLSEIPDDVRKDSHELPGLVL-GNGQSSGSHRHFLRSQGRQESVIFLQLQQSLRSGFLS 305
ASLSE+ D+R+ +PGL L G+ G H FLR ESV + L LS
Sbjct: 751 ASLSELYGDIREGLQRVPGLFLVERGRGGGEHHLFLR-----ESVNAVHPDYQLEVDDLS 805
Query: 304 LWRLARRLVQPRGHGIRIGDASCLADVPAYFIFVRLHKL 188
A V +G G + D + Y FVR+ L
Sbjct: 806 SALFAIDFVTEQGEGHVLTDED-TGEESHYDTFVRVADL 843
>UniRef50_A7A6R2 Cluster: Putative uncharacterized protein; n=1;
Bifidobacterium adolescentis L2-32|Rep: Putative
uncharacterized protein - Bifidobacterium adolescentis
L2-32
Length = 379
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = -3
Query: 469 EIPDDVRKDSHELPGLVLGNGQSSGSHRHFLRSQGRQESVIFLQLQQSLR 320
+I D ++KD H++ L+LG+G G ++ +R G + V+FL ++ +++
Sbjct: 225 DIVDVLKKDRHDVKLLLLGDGPLKGLYKSKVRQLGLSDIVLFLGVKPNVQ 274
>UniRef50_Q1YML2 Cluster: Possible glucose--fructose oxidoreductase;
n=2; Aurantimonadaceae|Rep: Possible glucose--fructose
oxidoreductase - Aurantimonas sp. SI85-9A1
Length = 368
Score = 33.9 bits (74), Expect = 3.4
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 299 PQAEETGPKRLLKLQKYHRFLSTLTPQEMPMATRGLAVSKDQSREF-MAVFPDIVRDLTE 475
P EE G ++ ++ R L T PQ + R + KDQ R+F +A PD V T
Sbjct: 308 PNGEE-GVLDMIVIEAIERALETGQPQALEPRNRQRRMGKDQVRDFPLADVPDFVNAATP 366
Query: 476 TG 481
TG
Sbjct: 367 TG 368
>UniRef50_A6R1I2 Cluster: Anucleate primary sterigmata protein B;
n=1; Ajellomyces capsulatus NAm1|Rep: Anucleate primary
sterigmata protein B - Ajellomyces capsulatus NAm1
Length = 1922
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +2
Query: 221 RHISKTTSVTNSDAMAPRLDQSASKSPQAEETGPKRLLKLQKYHRFLSTLT 373
RH+ TT V+ S+ AP Q +S S + PK L Q HRF ++ T
Sbjct: 449 RHLQDTTGVSGSEGDAP---QDSSASSERRRKRPKFLTSRQSVHRFSNSST 496
>UniRef50_Q9SAK1 Cluster: T8K14.10; n=2; Arabidopsis thaliana|Rep:
T8K14.10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 356
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -2
Query: 452 PERQP*TPGTGPWKRPVLG*PSAFPEESGSTGICDIFAASAVSSVRFPQPVATCSPT-GP 276
PE P P +G PVLG P + P S TG ++ + + +P P+A SP+ P
Sbjct: 203 PEIVPSPPESGYTPGPVLGPPYSEPGPSTPTGSIPSPSSGFLPPIVYPPPMAPPSPSVTP 262
Query: 275 ASGPW 261
S W
Sbjct: 263 TSAYW 267
>UniRef50_Q64CV3 Cluster: Putative uncharacterized protein; n=1;
uncultured archaeon GZfos19C8|Rep: Putative
uncharacterized protein - uncultured archaeon GZfos19C8
Length = 1109
Score = 33.5 bits (73), Expect = 4.5
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 377 QEMPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHI-DV-PEASKWLAKLLQYNVPNG 550
+EMP RGL S Q R ++ + D +++ E + + D+ PEA L LL Y +G
Sbjct: 456 EEMPAKIRGLCSSAFQKRNYLILVDDFEKNMPEWEEGVLDISPEAVPILEALLNYLPYSG 515
Query: 551 KKNRGLAT 574
K + + T
Sbjct: 516 KMTQLIIT 523
>UniRef50_Q2J910 Cluster: Serine/threonine protein kinase; n=1;
Frankia sp. CcI3|Rep: Serine/threonine protein kinase -
Frankia sp. (strain CcI3)
Length = 604
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 313 NRTEETAEAAKISQIPVDPDSSGNADGYPRTGRFQGPVPGVHGCLSGHRQGSH 471
+R ETA A S P PD G GY G GP P H + HR +H
Sbjct: 276 DRASETALARWWSLPPTPPDGEGPHGGYRDAG--YGPDPAHHRASAHHRASAH 326
>UniRef50_Q0BRS1 Cluster: Large terminase subunit; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Large terminase
subunit - Granulobacter bethesdensis (strain ATCC
BAA-1260 / CGDNIH1)
Length = 476
Score = 33.1 bits (72), Expect = 6.0
Identities = 23/79 (29%), Positives = 36/79 (45%)
Frame = -1
Query: 618 AXKFSFXSSIL*ARIVASPLFFLPFGTLYCNSLANHLLASGTSMCLPVSVRSLTMSGKTA 439
+ K ++ S I A ++A G + LA+H+ + G CL S+ +G
Sbjct: 74 SAKSTYASRIFPAWLMALQSGIRVIGASHTADLADHV-SRGVQSCLR-DYASILGTGLRR 131
Query: 438 MNSRDWSLETASPRVAIGI 382
N+RDW E S A+GI
Sbjct: 132 ENARDWEAENGSAYKAVGI 150
>UniRef50_Q5AR83 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 436
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -2
Query: 380 PEESGSTGICDIFAASAVSSVRFPQPVATCSPTGP 276
PEE G CD+ +A SSV P AT SP P
Sbjct: 320 PEEPGKPETCDLPECTAESSVEVDPPAATFSPAQP 354
>UniRef50_O94326 Cluster: Transcription factor; n=1;
Schizosaccharomyces pombe|Rep: Transcription factor -
Schizosaccharomyces pombe (Fission yeast)
Length = 609
Score = 33.1 bits (72), Expect = 6.0
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3
Query: 574 RGQSPILLTVWYIILQQLSQPFAGFRNIN 488
R P +++ Y+ LQ L++P+ GFRNIN
Sbjct: 522 RAMDPKVVSTSYVSLQILNKPYVGFRNIN 550
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 621,408,277
Number of Sequences: 1657284
Number of extensions: 12845730
Number of successful extensions: 44102
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 42400
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44082
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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