Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_P01
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protei... 207 1e-53
BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein. 207 1e-53
BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a ... 207 1e-53
AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a ... 205 6e-53
AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA seq... 198 1e-50
BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein. 121 1e-27
AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a ... 121 1e-27
BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for MG... 60 6e-09
X89214-1|CAA61501.1| 385|Homo sapiens haptoglobin-related prote... 29 9.4
X01794-1|CAA25927.1| 348|Homo sapiens haptoglobin protein. 29 9.4
M69197-2|AAA88079.1| 348|Homo sapiens haptoglobin-related prote... 29 9.4
K03431-1|AAA88081.1| 348|Homo sapiens haptoglobin-related prote... 29 9.4
AC004682-2|AAC27433.1| 346|Homo sapiens haptoglobin-related pro... 29 9.4
>X56932-1|CAA40254.1| 203|Homo sapiens 23 kD highly basic protein
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC071929-1|AAH71929.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC070223-1|AAH70223.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC065236-1|AAH65236.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC062537-1|AAH62537.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC004900-1|AAH04900.2| 201|Homo sapiens RPL13A protein protein.
Length = 201
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 3 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 62
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 63 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 122
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 123 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 155
>BC001836-1|AAH01836.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC001675-1|AAH01675.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC000514-1|AAH00514.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>AB028893-1|BAA88214.1| 203|Homo sapiens ribosomal protein L13a
protein.
Length = 203
Score = 207 bits (506), Expect = 1e-53
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>AK222747-1|BAD96467.1| 203|Homo sapiens ribosomal protein L13a
variant protein.
Length = 203
Score = 205 bits (501), Expect = 6e-53
Identities = 90/153 (58%), Positives = 114/153 (74%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVVRCE INISGNF+ NKLK ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL L+ +DG PPP+D
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDHLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>AL356120-1|CAH73036.1| 203|Homo sapiens protein ( Human DNA
sequence from clone RP11-365K22 on chromosome 13
Contains a novel gene similar to ribosomal protein L13a
(RPL13A). ).
Length = 203
Score = 198 bits (482), Expect = 1e-50
Identities = 87/153 (56%), Positives = 112/153 (73%)
Frame = +3
Query: 42 KAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFXNKLKLMSFLRKRCNV 221
+ +V+DGRGHLLGRLAA++AK +L G KVVVV CE INISGNF+ NKL ++FLRKR N
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVCCEGINISGNFYRNKLNYLAFLRKRMNT 64
Query: 222 NPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXX 401
+P+RGP+HF APS + W+TVRGM+PHKT+RG+ AL RL+ DG PPP+D
Sbjct: 65 SPSRGPYHFRAPSRVFWRTVRGMLPHKTKRGQAALDRLKVSDGIPPPYDKKKRMVVPAAL 124
Query: 402 XXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 157
>BC105605-1|AAI05606.1| 142|Homo sapiens RPL13A protein protein.
Length = 142
Score = 121 bits (292), Expect = 1e-27
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3
Query: 216 NVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 395
N NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 396 XXXXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 96
>AB082924-1|BAC16800.1| 142|Homo sapiens ribosomal protein L13a
protein.
Length = 142
Score = 121 bits (292), Expect = 1e-27
Identities = 50/95 (52%), Positives = 65/95 (68%)
Frame = +3
Query: 216 NVNPARGPFHFXAPSXILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXX 395
N NP+RGP+HF APS I W+TVRGM+PHKT+RG+ AL RL+ +DG PPP+D
Sbjct: 2 NTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPA 61
Query: 396 XXXXFCLKPXRNYCHVGRLSHEIGWKYRDVVRKLE 500
LKP R + ++GRL+HE+GWKY+ V LE
Sbjct: 62 ALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLE 96
>BC067891-1|AAH67891.1| 102|Homo sapiens Unknown (protein for
MGC:87657) protein.
Length = 102
Score = 59.7 bits (138), Expect = 6e-09
Identities = 27/71 (38%), Positives = 38/71 (53%)
Frame = +3
Query: 288 MIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPXRNYCHVGRLSHEIG 467
M+ HKT+RG +L L+ +DG PPP+D LKP R + +GR + E+
Sbjct: 1 MLRHKTKRGHASLDCLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFALLGRQAQEVR 60
Query: 468 WKYRDVVRKLE 500
WKY+ V LE
Sbjct: 61 WKYQAVTATLE 71
>X89214-1|CAA61501.1| 385|Homo sapiens haptoglobin-related protein
protein.
Length = 385
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 CLKPXRNYCHVGRLSHEIGWKYRDVVRKLEH 503
CL P +NY VGR+ + GW D + +H
Sbjct: 245 CL-PSKNYAEVGRVGYVSGWGQSDNFKLTDH 274
>X01794-1|CAA25927.1| 348|Homo sapiens haptoglobin protein.
Length = 348
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 CLKPXRNYCHVGRLSHEIGWKYRDVVRKLEH 503
CL P +NY VGR+ + GW D + +H
Sbjct: 208 CL-PSKNYAEVGRVGYVSGWGQSDNFKLTDH 237
>M69197-2|AAA88079.1| 348|Homo sapiens haptoglobin-related protein
protein.
Length = 348
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 CLKPXRNYCHVGRLSHEIGWKYRDVVRKLEH 503
CL P +NY VGR+ + GW D + +H
Sbjct: 208 CL-PSKNYAEVGRVGYVSGWGQSDNFKLTDH 237
>K03431-1|AAA88081.1| 348|Homo sapiens haptoglobin-related protein
protein.
Length = 348
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 CLKPXRNYCHVGRLSHEIGWKYRDVVRKLEH 503
CL P +NY VGR+ + GW D + +H
Sbjct: 208 CL-PSKNYAEVGRVGYVSGWGQSDNFKLTDH 237
>AC004682-2|AAC27433.1| 346|Homo sapiens haptoglobin-related
protein precursor protein.
Length = 346
Score = 29.1 bits (62), Expect = 9.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 411 CLKPXRNYCHVGRLSHEIGWKYRDVVRKLEH 503
CL P +NY VGR+ + GW D + +H
Sbjct: 206 CL-PSKNYAEVGRVGYVSGWGQSDNFKLTDH 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,222,971
Number of Sequences: 237096
Number of extensions: 1437976
Number of successful extensions: 10028
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 9997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10028
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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