Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_P01
         (511 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   5.6  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    21   9.8  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 12/44 (27%), Positives = 17/44 (38%)
 Frame = -1

Query: 307 SVLCGIMPLTVFHRXLDGAXKWKGPRAGFTLHLLRRNDISLSLF 176
           SV+C +    VFH        W      F       ++I+ SLF
Sbjct: 164 SVVCSLPQTIVFHLETHPNVTWYSQCVTFNAFPTYTHEITYSLF 207


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 20.6 bits (41), Expect = 9.8
 Identities = 7/24 (29%), Positives = 16/24 (66%)
 Frame = -1

Query: 172 KKLPEILICSQRTTTTLFPSRRTL 101
           K L + L+C ++ +TT+ P+ + +
Sbjct: 69  KLLSDGLMCVEKVSTTIVPTTQEI 92


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,007
Number of Sequences: 438
Number of extensions: 2710
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)