Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O19
         (445 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_1014 - 29687343-29687410,29688054-29688191,29689246-296892...    27   6.8  
02_02_0419 - 10009686-10012568                                         27   6.8  
08_02_0706 + 20205305-20205331,20205475-20205592,20206235-202064...    27   9.0  

>03_05_1014 - 29687343-29687410,29688054-29688191,29689246-29689294,
            29689623-29689728,29690184-29690332,29690840-29690921,
            29691308-29691360,29691644-29691729,29691855-29691909,
            29692179-29692579,29693564-29693660,29694191-29694322,
            29694426-29694476,29694659-29694751,29694917-29694992,
            29695711-29695856,29696009-29696043,29696056-29696107,
            29696290-29696401,29696617-29696813,29697456-29697560,
            29697667-29697819,29698317-29698424,29698608-29698752,
            29699374-29699432,29701397-29701441,29701677-29701730,
            29701901-29702113,29702873-29702958,29704492-29704572,
            29704670-29704729,29705599-29705644,29706212-29706286,
            29706376-29706512,29708306-29708366,29708726-29708743,
            29709710-29709743,29709811-29709902,29709997-29710029
          Length = 1260

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 17/84 (20%), Positives = 38/84 (45%)
 Frame = +2

Query: 77   NQLMLRAIILCLILXTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 256
            N  ++ +I+L ++L     Y    + P      +IL +  ++    ++ D+     +  K
Sbjct: 1148 NLWLVGSIVLTMLLHISVLY----IEPLSALFSVILIDEVLKFFSRSSRDLNARKASKYK 1203

Query: 257  IGHPKLXQIDVSSTEKGFDFDGLF 328
            +G  +  Q  + S  KG+++  LF
Sbjct: 1204 MGQKRSKQDGILSNRKGYEYSKLF 1227


>02_02_0419 - 10009686-10012568
          Length = 960

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
 Frame = +2

Query: 242 PAPLKIGHPKLXQIDVSSTE-KGFDFDGLFNFXKLINKEVDLSDTN 376
           P P + G P+L ++DVSS    G   + L  F  L++  +DLS+ N
Sbjct: 553 PFPQEFGAPELVELDVSSNMISGIVPETLCRFPNLLH--LDLSNNN 596


>08_02_0706 +
           20205305-20205331,20205475-20205592,20206235-20206416,
           20206505-20206612,20206717-20206781,20207152-20207257,
           20207592-20207675,20208540-20208668,20208974-20209041,
           20209674-20209846,20210371-20210444,20210515-20210628,
           20210834-20210920,20211028-20211119,20211205-20211307
          Length = 509

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +1

Query: 370 YESQVYRNAICNRVIVNAFPTYKN 441
           YE  V  N    RVI   FPTY+N
Sbjct: 272 YEDVVLENLDIMRVIFGIFPTYRN 295


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,596,144
Number of Sequences: 37544
Number of extensions: 170645
Number of successful extensions: 302
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 847740284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)