Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O19
         (445 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   6.1  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   6.1  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   6.1  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   6.1  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   8.0  

>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 245 QALSTLHRD*PPREALHILHLKSC 174
           +A++ +H+D P      +  LKSC
Sbjct: 124 EAVAVIHKDLPINNVQGLRGLKSC 147


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 245 QALSTLHRD*PPREALHILHLKSC 174
           +A++ +H+D P      +  LKSC
Sbjct: 124 EAVAVIHKDLPINNVQGLRGLKSC 147


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -3

Query: 245 QALSTLHRD*PPREALHILHLKSC 174
           +A++ +H+D P      +  LKSC
Sbjct: 124 EAVAVIHKDLPINNVQGLRGLKSC 147


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 6.1
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +2

Query: 314 FDGLFNFXKLINKEVDLSDT 373
           +D + N  KLI K VD +DT
Sbjct: 450 YDLIGNGTKLIIKNVDYADT 469


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +2

Query: 158 FPGKSHMILGEGYVRL 205
           FPG   M++G G  R+
Sbjct: 375 FPGXYTMVIGSGVYRI 390


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,356
Number of Sequences: 438
Number of extensions: 2019
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11574126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)