Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O18
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   2.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   3.7  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   8.5  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   8.5  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 49  CPKENARPATASSTLRT 99
           C K  ARP+T  + LRT
Sbjct: 255 CGKSYARPSTLKTHLRT 271


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +1

Query: 70  PATASSTLRTMLQLQLVIADVXPATGRAAD 159
           P  A+ +  T +Q    I  V P+T  AAD
Sbjct: 34  PNFAAPSTSTAVQRPQAILQVRPSTSAAAD 63


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 181 CGAIRRMGESDDC 219
           CG++R + E  DC
Sbjct: 413 CGSLREIKEVSDC 425


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKE 60
           + HAA  +V L  PKE
Sbjct: 310 VEHAANLWVKLGTPKE 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,605
Number of Sequences: 336
Number of extensions: 1147
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)