Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O18
         (419 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191     32   0.22 
03_05_0610 - 26108546-26108671,26108739-26108789,26109410-261095...    30   0.66 
07_01_0600 - 4462337-4462774                                           27   6.1  
10_07_0122 - 13079268-13079801                                         27   8.1  
10_06_0008 - 9533424-9533475,9533526-9535344,9535599-9536364,955...    27   8.1  

>03_02_0976 + 12841257-12841306,12841396-12841528,12842126-12842191
          Length = 82

 Score = 31.9 bits (69), Expect = 0.22
 Identities = 13/16 (81%), Positives = 15/16 (93%)
 Frame = +3

Query: 60  KCSASNRLIHAKDHAS 107
           KCSA+NR+I AKDHAS
Sbjct: 16  KCSATNRIITAKDHAS 31


>03_05_0610 -
           26108546-26108671,26108739-26108789,26109410-26109542,
           26109633-26109682
          Length = 119

 Score = 30.3 bits (65), Expect = 0.66
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +3

Query: 60  KCSASNRLIHAKDHAS 107
           KCS +NR+I AKDHAS
Sbjct: 16  KCSTTNRIITAKDHAS 31


>07_01_0600 - 4462337-4462774
          Length = 145

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 14  CITPPVHSLXCPARRKMLGQQPPHP 88
           C + PVH L  P R  ++  +PPHP
Sbjct: 49  CYSAPVH-LRLPVRHTIIVVRPPHP 72


>10_07_0122 - 13079268-13079801
          Length = 177

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 151 HDLWRGLRQQSLAVAEAWSLAWMRRLLAEHFPSGR 47
           H  WRG R +   V    SL WM+  +A     G+
Sbjct: 4   HGQWRGRRLRRTQVMACMSLRWMQTKVAAAVDKGK 38


>10_06_0008 -
           9533424-9533475,9533526-9535344,9535599-9536364,
           9551969-9552097
          Length = 921

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 14  CITPPVHSLXCPARRKMLGQQPPHPR*G 97
           C  P   +  CP  R+  GQ PP P  G
Sbjct: 655 CFEPRHFADKCPKPRRQQGQAPPRPNNG 682


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,170,430
Number of Sequences: 37544
Number of extensions: 155702
Number of successful extensions: 381
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 381
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)