Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O18
         (419 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21 pro...    68   1e-11
CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.                68   1e-11
BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21 p...    68   1e-11
AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21 p...    68   1e-11
AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21 p...    68   1e-11
AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21 p...    68   1e-11
BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.        64   2e-10
AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21 p...    51   1e-06
AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21 p...    40   0.004
X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation f...    33   0.39 
BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.        33   0.39 
AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21 p...    33   0.39 

>L04483-1|AAA99893.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAKNY 264
           RRMGESDD I+RL   DGI++KN+
Sbjct: 60  RRMGESDDSILRLAKADGIVSKNF 83


>CR542132-1|CAG46929.1|   83|Homo sapiens RPS21 protein.
          Length = 83

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAKNY 264
           RRMGESDD I+RL   DGI++KN+
Sbjct: 60  RRMGESDDSILRLAKADGIVSKNF 83


>BC021990-1|AAH21990.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAKNY 264
           RRMGESDD I+RL   DGI++KN+
Sbjct: 60  RRMGESDDSILRLAKADGIVSKNF 83


>AL121832-3|CAC21458.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAKNY 264
           RRMGESDD I+RL   DGI++KN+
Sbjct: 60  RRMGESDDSILRLAKADGIVSKNF 83


>AJ250907-1|CAB83213.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAKNY 264
           RRMGESDD I+RL   DGI++KN+
Sbjct: 60  RRMGESDDSILRLAKADGIVSKNF 83


>AB061843-1|BAB79481.1|   83|Homo sapiens ribosomal protein S21
           protein.
          Length = 83

 Score = 67.7 bits (158), Expect = 1e-11
 Identities = 35/84 (41%), Positives = 49/84 (58%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAKNY 264
           RRMGESDD I+RL   DGI++KN+
Sbjct: 60  RRMGESDDSILRLAKADGIVSKNF 83


>BC018140-1|AAH18140.1|   81|Homo sapiens RPS21 protein protein.
          Length = 81

 Score = 64.1 bits (149), Expect = 2e-10
 Identities = 34/82 (41%), Positives = 47/82 (57%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRMGESDDCIVRLTXKDGILAK 258
           RRMGESDD I+RL   DGI++K
Sbjct: 60  RRMGESDDSILRLAKADGIVSK 81


>AB007157-1|BAA25821.1|   54|Homo sapiens ribosomal protein S21
           protein.
          Length = 54

 Score = 51.2 bits (117), Expect = 1e-06
 Identities = 23/41 (56%), Positives = 29/41 (70%)
 Frame = +1

Query: 109 LQLVIADVXPATGRAADTSKMYVVCGAIRRMGESDDCIVRL 231
           +Q+ +A+V   TGR     K Y +CGAIRRMGESDD I+RL
Sbjct: 12  IQMNVAEVDKVTGRFNGQFKTYAICGAIRRMGESDDSILRL 52


>AL121832-2|CAC29248.1|   90|Homo sapiens ribosomal protein S21
           protein.
          Length = 90

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 22/63 (34%), Positives = 32/63 (50%)
 Frame = +1

Query: 13  MHHAAGAFVXLSCPKENARPATASSTLRTMLQLQLVIADVXPATGRAADTSKMYVVCGAI 192
           M + AG FV L  P++    +      +    +Q+ +A+V   TGR     K Y +CGAI
Sbjct: 1   MQNDAGEFVDLYVPRK-CSASNRIIGAKDHASIQMNVAEVDKVTGRFNGQFKTYAICGAI 59

Query: 193 RRM 201
           RRM
Sbjct: 60  RRM 62


>X79563-1|CAA56100.2|   97|Homo sapiens 8.2 kDa differentiation
           factor protein.
          Length = 97

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 60  KCSASNRLIHAKDHAS 107
           KCSASNR+I AKDHAS
Sbjct: 16  KCSASNRIIGAKDHAS 31


>BC027976-1|AAH27976.1|   66|Homo sapiens RPS21 protein protein.
          Length = 66

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 60  KCSASNRLIHAKDHAS 107
           KCSASNR+I AKDHAS
Sbjct: 16  KCSASNRIIGAKDHAS 31


>AL121832-1|CAC29247.1|   66|Homo sapiens ribosomal protein S21
           protein.
          Length = 66

 Score = 33.1 bits (72), Expect = 0.39
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = +3

Query: 60  KCSASNRLIHAKDHAS 107
           KCSASNR+I AKDHAS
Sbjct: 16  KCSASNRIIGAKDHAS 31


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,324,033
Number of Sequences: 237096
Number of extensions: 803387
Number of successful extensions: 1244
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)