Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O16
         (335 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0195 + 1612938-1613003,1613026-1613161,1614624-1614725,161...    79   7e-16
02_01_0089 + 633642-633644,633728-633863,635356-635457,635565-63...    79   7e-16
02_05_1204 + 34936696-34936698,34936809-34936944,34937794-349378...    79   9e-16
11_06_0288 - 21962546-21962977,21963041-21963211,21963411-21963788     27   3.8  
08_01_0064 + 444888-444959,445073-445277,445736-445901,446029-44...    26   8.7  

>08_01_0195 +
           1612938-1613003,1613026-1613161,1614624-1614725,
           1614833-1614876
          Length = 115

 Score = 79.4 bits (187), Expect = 7e-16
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = +2

Query: 23  CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG 202
           CG  S+H+QKS C+ CGYPAA++R Y+WSVKA          MR+++ V RRF++ F+EG
Sbjct: 43  CGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFREG 102

Query: 203 KPTPPKK 223
               P+K
Sbjct: 103 TEATPRK 109


>02_01_0089 +
           633642-633644,633728-633863,635356-635457,635565-635608
          Length = 94

 Score = 79.4 bits (187), Expect = 7e-16
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = +2

Query: 23  CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG 202
           CG  S+H+QKS C+ CGYPAA++R Y+WSVKA          MR+++ V RRF++ F+EG
Sbjct: 22  CGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYMRHVPRRFKSNFREG 81

Query: 203 KPTPPKK 223
               P+K
Sbjct: 82  TEATPRK 88


>02_05_1204 +
           34936696-34936698,34936809-34936944,34937794-34937895,
           34938153-34938199
          Length = 95

 Score = 79.0 bits (186), Expect = 9e-16
 Identities = 32/67 (47%), Positives = 45/67 (67%)
 Frame = +2

Query: 23  CGISSYHIQKSKCAQCGYPAAKLRSYHWSVKAXXXXXXXXXXMRHLKIVRRRFRNGFKEG 202
           CG  S+H+QKS C+ CGYPAA++R Y+WSVKA          MR+L+ V +RF++ F+EG
Sbjct: 22  CGRRSFHLQKSTCSSCGYPAARIRKYNWSVKAIRRKTTGTGRMRYLRHVPKRFKSNFREG 81

Query: 203 KPTPPKK 223
               P+K
Sbjct: 82  TEAAPRK 88


>11_06_0288 - 21962546-21962977,21963041-21963211,21963411-21963788
          Length = 326

 Score = 27.1 bits (57), Expect = 3.8
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +1

Query: 73  ISCSKITILPLVSEG*AQEDYWNW--PHASFEDC 168
           I+   +T +  +S   + +D W W  PH  +EDC
Sbjct: 116 IALPPVTTIEQLSIARSGDDKWTWLPPHKDYEDC 149


>08_01_0064 +
           444888-444959,445073-445277,445736-445901,446029-446251,
           446982-447058,447370-447557,447845-447942,448202-448335,
           448421-448555,448832-448960,449263-449632,449897-450018,
           450155-450274,450396-450626,450706-450894,450978-451089,
           451193-451438
          Length = 938

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = +3

Query: 60  APNVDILQQNYDPTTGQ*RLSAGRLLELAACVI*RLSGGASVMVLKKGNQRRPRRLXLRH 239
           +P  DI+ Q YDPT    +L    + +       R      ++ L K  ++RPR + LR 
Sbjct: 304 SPKPDIIVQRYDPTYEATKLHFDDVAQ-------RYGHPIIILNLTKTFEKRPREMMLRR 356

Query: 240 E 242
           E
Sbjct: 357 E 357


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,078,523
Number of Sequences: 37544
Number of extensions: 115163
Number of successful extensions: 242
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 242
length of database: 14,793,348
effective HSP length: 72
effective length of database: 12,090,180
effective search space used: 471517020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)