Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O16
         (335 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   5.3  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    20   9.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    20   9.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    20   9.2  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 5.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 31  LVISHSKIKMRPMWI 75
           L + H+KI +RP W+
Sbjct: 220 LHLRHTKIWLRPDWL 234


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 88  ITILPLVSEG*AQEDYWNWPHASFEDCQE 174
           + +LP +         +++P  SFED  E
Sbjct: 38  VLVLPSIERDQMMAATFDFPSLSFEDSDE 66


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 88  ITILPLVSEG*AQEDYWNWPHASFEDCQE 174
           + +LP +         +++P  SFED  E
Sbjct: 38  VLVLPSIERDQMMAATFDFPSLSFEDSDE 66


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +1

Query: 88  ITILPLVSEG*AQEDYWNWPHASFEDCQE 174
           + +LP +         +++P  SFED  E
Sbjct: 38  VLVLPSIERDQMMAATFDFPSLSFEDSDE 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,945
Number of Sequences: 438
Number of extensions: 1314
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)