Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O10
         (392 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC106036-1|AAI06037.1|   87|Homo sapiens coiled-coil-helix-coile...    61   1e-09
AF242180-1|AAF60345.1|   96|Homo sapiens E2IG2 protein.                61   1e-09
BC113967-1|AAI13968.1|  245|Homo sapiens C9orf125 protein protein.     29   4.1  
BC033550-1|AAH33550.1|  403|Homo sapiens C9orf125 protein protein.     29   4.1  
BC006115-1|AAH06115.1|  403|Homo sapiens chromosome 9 open readi...    29   4.1  
AL353621-7|CAI14616.1|  403|Homo sapiens chromosome 9 open readi...    29   4.1  

>BC106036-1|AAI06037.1|   87|Homo sapiens
           coiled-coil-helix-coiled-coil-helix domain containing 8
           protein.
          Length = 87

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = +3

Query: 135 DDDPVEGMLKKTGCLELHYKVQECIAETKDWRKCQTAVNNFRDCINK---HKQEETTKNK 305
           ++DP++ ++ ++GC   H+ VQEC+A+ +DWR+CQ  V  F+DC+++    +QEE  + +
Sbjct: 21  EEDPLDQLISRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQ 80


>AF242180-1|AAF60345.1|   96|Homo sapiens E2IG2 protein.
          Length = 96

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 22/60 (36%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
 Frame = +3

Query: 135 DDDPVEGMLKKTGCLELHYKVQECIAETKDWRKCQTAVNNFRDCINK---HKQEETTKNK 305
           ++DP++ ++ ++GC   H+ VQEC+A+ +DWR+CQ  V  F+DC+++    +QEE  + +
Sbjct: 30  EEDPLDQLISRSGCAASHFAVQECMAQHQDWRQCQPQVQAFKDCMSEQQARRQEELQRRQ 89


>BC113967-1|AAI13968.1|  245|Homo sapiens C9orf125 protein protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 222 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 88
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 156 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 200


>BC033550-1|AAH33550.1|  403|Homo sapiens C9orf125 protein protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 222 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 88
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 314 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 358


>BC006115-1|AAH06115.1|  403|Homo sapiens chromosome 9 open reading
           frame 125 protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 222 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 88
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 314 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 358


>AL353621-7|CAI14616.1|  403|Homo sapiens chromosome 9 open reading
           frame 125 protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = -3

Query: 222 LSFRRCIPALYSVVPDSQFFSACLPRDHHHCRSVLEVL*SYFCRK 88
           L  RR  P+LYSVVP SQ  +  +       R  L  L   +C K
Sbjct: 314 LELRRLSPSLYSVVPASQCCTPAMLFPAPAARRTLTYLSQVYCHK 358


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,200,210
Number of Sequences: 237096
Number of extensions: 759589
Number of successful extensions: 1334
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1334
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2756025120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)