Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_O08
(313 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1020 + 33878391-33878582,33879194-33879271,33879363-338795... 29 0.58
10_07_0161 - 13674631-13675433,13675793-13675862 28 1.3
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 28 1.8
11_01_0763 + 6402901-6403971,6404581-6404826 27 3.1
07_01_0867 - 7198874-7199764 27 3.1
12_01_0541 + 4251931-4254141 27 4.1
11_04_0273 + 15643469-15643654,15644882-15644914,15645688-15645735 27 4.1
07_01_1021 + 8736032-8736106,8736336-8736374,8737362-8737493,873... 27 4.1
06_01_0282 + 2071397-2071843 27 4.1
12_02_1215 + 27070164-27070302,27070308-27071098 26 5.4
12_02_0285 - 16828173-16828661 26 5.4
12_02_0284 - 16791153-16791212,16791392-16791925,16792266-167926... 26 5.4
12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192 26 5.4
09_05_0006 - 20030673-20030895,20031432-20031478,20031597-200316... 26 5.4
01_07_0139 - 41385823-41386656 26 5.4
11_06_0586 + 25253863-25254285 26 7.2
08_02_1312 + 26055372-26056056,26056935-26057187,26057277-260580... 26 7.2
05_05_0343 - 24234026-24234235,24234254-24234502,24234642-242349... 26 7.2
12_02_0634 + 21416205-21416954 25 9.5
10_07_0012 - 11791524-11791957,11792014-11792108,11792163-117922... 25 9.5
09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817 25 9.5
06_01_0145 + 1092764-1093351 25 9.5
06_01_0005 - 125809-126339 25 9.5
05_06_0189 + 26257587-26257791,26257962-26258003,26258064-262584... 25 9.5
04_01_0376 - 4929447-4929731 25 9.5
01_06_0343 + 28566513-28566644,28566791-28568494,28569178-285692... 25 9.5
>01_06_1020 +
33878391-33878582,33879194-33879271,33879363-33879524,
33879789-33880106,33880477-33880671
Length = 314
Score = 29.5 bits (63), Expect = 0.58
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 29 VXCSHLGRPRMPRPRAQLAPGWPPRAGE 112
+ CSHLGRP+ P+ LAP PR E
Sbjct: 59 ILCSHLGRPKGITPKFSLAP-LVPRLSE 85
>10_07_0161 - 13674631-13675433,13675793-13675862
Length = 290
Score = 28.3 bits (60), Expect = 1.3
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -2
Query: 117 GXSPARGGQPGASWARGRGMRGRPRW 40
G + GG G WA G G +G P W
Sbjct: 205 GARGSSGGGGGGGWAGGGGGQGNPSW 230
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 27.9 bits (59), Expect = 1.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 47 GRPRMPRPRAQLAPGWPPR 103
G PR P P + PG+PPR
Sbjct: 153 GMPRYPGPYPMMRPGFPPR 171
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 27.1 bits (57), Expect = 3.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -2
Query: 117 GXSPARGGQPGASWARGRGMRGRPRW 40
G ARGG G ARG GRP W
Sbjct: 228 GRLGARGGDGGRLGARGAADGGRPDW 253
>07_01_0867 - 7198874-7199764
Length = 296
Score = 27.1 bits (57), Expect = 3.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 179 ELLTRLHRDLISADRRDLXLVNSSLRCPVLVKXE 280
+L RD+ R DL V SS RCPVL K +
Sbjct: 151 QLTALAFRDVRFTGRCDLGAVVSSKRCPVLQKLQ 184
>12_01_0541 + 4251931-4254141
Length = 736
Score = 26.6 bits (56), Expect = 4.1
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 306 VPIHRWVKDSXLTS 265
VP+HRWVKD T+
Sbjct: 470 VPLHRWVKDQLATT 483
>11_04_0273 +
15643469-15643654,15644882-15644914,15645688-15645735
Length = 88
Score = 26.6 bits (56), Expect = 4.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 99 GGQPGASWARGRGMRGRPRWLHXTR 25
G ASWAR G G P W+ R
Sbjct: 4 GSSDSASWARRGGGGGEPNWVDVWR 28
>07_01_1021 +
8736032-8736106,8736336-8736374,8737362-8737493,
8737848-8737892,8738450-8739157,8740679-8740807,
8741290-8741346,8742937-8742954
Length = 400
Score = 26.6 bits (56), Expect = 4.1
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -2
Query: 102 RGGQPGASWARGRGMRGRPRW 40
RGG GAS ARG G GR RW
Sbjct: 174 RGGTAGASPARGGGAVGR-RW 193
>06_01_0282 + 2071397-2071843
Length = 148
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -2
Query: 105 ARGGQPGASWARGRG-MRGRPRWLHXTRAAVGA 10
+ G P A+W RGRG W+ AA G+
Sbjct: 74 SEGATPVAAWRRGRGRWAAAAEWMRRRYAATGS 106
>12_02_1215 + 27070164-27070302,27070308-27071098
Length = 309
Score = 26.2 bits (55), Expect = 5.4
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = -2
Query: 123 WHGXSPARGGQPGASWARGRGMRGRPRWLHXTRAAVGALTS 1
WHG + +R G A G G G RW R V A+ +
Sbjct: 135 WHGAAASRMLVKGDGTAAGCGCGGWSRWQRRRRPFVEAVVT 175
>12_02_0285 - 16828173-16828661
Length = 162
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 126 RWHGXSPARGGQPGASWARGRGMRGRP 46
R G G ASW+RGR R RP
Sbjct: 56 RCSGEEEVMPGMRAASWSRGRWWRRRP 82
>12_02_0284 -
16791153-16791212,16791392-16791925,16792266-16792637,
16793754-16794105,16794107-16794795,16821179-16821574
Length = 800
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 126 RWHGXSPARGGQPGASWARGRGMRGRP 46
R G G ASW+RGR R RP
Sbjct: 56 RCSGEEEVMPGMRAASWSRGRWWRRRP 82
>12_01_0932 + 9253975-9254676,9254976-9255092,9255160-9255192
Length = 283
Score = 26.2 bits (55), Expect = 5.4
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = -2
Query: 126 RWHGXSPARGGQPGASWARGRGMRG 52
R H S A+G +PGA A GRG G
Sbjct: 68 RAHCHSMAQGRRPGAGVAAGRGRGG 92
>09_05_0006 -
20030673-20030895,20031432-20031478,20031597-20031665,
20032590-20032725,20032900-20033067,20034286-20034354,
20034535-20034631,20034742-20034820,20035702-20035872
Length = 352
Score = 26.2 bits (55), Expect = 5.4
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 14 PTAARVXCSHLGRPRMPRPR 73
P R +HLGRPR+ R R
Sbjct: 37 PAGERALAAHLGRPRLQRRR 56
>01_07_0139 - 41385823-41386656
Length = 277
Score = 26.2 bits (55), Expect = 5.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -2
Query: 90 PGASWARGRGMRGRPRWLHXTRA 22
P AS +RGR RG P W A
Sbjct: 222 PDASRSRGRSARGSPSWCRSAAA 244
>11_06_0586 + 25253863-25254285
Length = 140
Score = 25.8 bits (54), Expect = 7.2
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 126 RWHGXSPARGGQPGASWARGRGMRGRP 46
R G G ASW+RGR R RP
Sbjct: 34 RSSGEEEVMPGMRAASWSRGRWWRRRP 60
>08_02_1312 +
26055372-26056056,26056935-26057187,26057277-26058081,
26058828-26058952,26059081-26059165,26059473-26059626,
26059724-26059761,26059842-26060109,26060257-26060380,
26060508-26060868,26061904-26062272,26062528-26062609,
26063042-26063193
Length = 1166
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 206 LISADRRDLXLVNSSLRCPVLVKXESF 286
++ D RD+ SL CPV+ K S+
Sbjct: 821 ILYRDSRDVLTAECSLECPVVAKITSY 847
>05_05_0343 -
24234026-24234235,24234254-24234502,24234642-24234959,
24235111-24235371,24235457-24235534,24235834-24236262
Length = 514
Score = 25.8 bits (54), Expect = 7.2
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 29 VXCSHLGRPRMPRPRAQLAPGWPPRAGE 112
+ SHLGRP+ P+ LAP PR E
Sbjct: 138 ILSSHLGRPKGVTPKFSLAP-LVPRLSE 164
>12_02_0634 + 21416205-21416954
Length = 249
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 126 RWHGXSPARGGQPGASWARGRGMRGRP 46
R G G ASW+RGR R RP
Sbjct: 88 RCSGEEEVIPGMRAASWSRGRWWRRRP 114
>10_07_0012 -
11791524-11791957,11792014-11792108,11792163-11792226,
11792327-11792591,11792670-11793127,11793271-11793592
Length = 545
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -2
Query: 111 SPARGGQPGASWARGRGMRGRPR 43
+PA + + +RGRG RGRPR
Sbjct: 482 NPANFEKVRKAMSRGRGRRGRPR 504
>09_02_0080 - 4020020-4020047,4020160-4022044,4022079-4022817
Length = 883
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 8 SAPTAARVXCSHLGRPRMPRPRAQLAPGWPPRAGEXP 118
+AP A R HL RMP P P P P
Sbjct: 421 TAPLALRAPAPHLCVSRMPPPLVPTPPAHAPPVATPP 457
>06_01_0145 + 1092764-1093351
Length = 195
Score = 25.4 bits (53), Expect = 9.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2
Query: 108 PARGGQPGASWARGRGMRG 52
P + G+PG RGRG RG
Sbjct: 18 PGQPGEPGQPGGRGRGGRG 36
>06_01_0005 - 125809-126339
Length = 176
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -2
Query: 117 GXSPARGGQPGASWARGRGMRGRPR 43
G PARGG P W R R R R
Sbjct: 141 GRVPARGGDPRDQWRCHRRWRRRAR 165
>05_06_0189 +
26257587-26257791,26257962-26258003,26258064-26258436,
26258515-26258656,26259356-26259514,26259599-26259661,
26259992-26260180
Length = 390
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 117 GXSPARGGQPGASWARGRGMRG 52
G +P+RGG RGRG RG
Sbjct: 89 GSAPSRGGYGRGERGRGRGGRG 110
>04_01_0376 - 4929447-4929731
Length = 94
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/36 (30%), Positives = 14/36 (38%)
Frame = -2
Query: 120 HGXSPARGGQPGASWARGRGMRGRPRWLHXTRAAVG 13
H + RG G +W R R WL R + G
Sbjct: 42 HASAVRRGAVHGHAWCGARAERSCAAWLQQGRCSAG 77
>01_06_0343 +
28566513-28566644,28566791-28568494,28569178-28569240,
28569241-28569310,28570438-28570715,28571886-28571963,
28573017-28573715,28573811-28573913,28574096-28574196,
28574272-28574446,28574843-28575013,28575534-28575634,
28575706-28575771
Length = 1246
Score = 25.4 bits (53), Expect = 9.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 90 PGASWARGRGMRGRPRWLHXTRAA 19
PGAS+AR M+G W+ R A
Sbjct: 774 PGASFARHMSMQGFDTWIVEVRGA 797
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,257,532
Number of Sequences: 37544
Number of extensions: 107579
Number of successful extensions: 448
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 388087168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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