Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O07
         (418 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   4.8  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   8.4  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   8.4  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    20   8.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 386 NLD*LKNIMMIYLLSNVI 333
           +L  ++ +M++YLL NV+
Sbjct: 280 HLSDVRYVMVVYLLKNVV 297


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 102 TSSAIQNGVNLIEVQLXTSN 161
           TSSA+ N   LIE  + TSN
Sbjct: 17  TSSAL-NSTPLIEFNISTSN 35


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 102 TSSAIQNGVNLIEVQLXTSN 161
           TSSA+ N   LIE  + TSN
Sbjct: 17  TSSAL-NSTPLIEFNISTSN 35


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 298 VVGKLXTYNLILITLDNK 351
           ++G + T+ +I+I  +NK
Sbjct: 329 IIGNVTTFFIIIIQFNNK 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,445
Number of Sequences: 336
Number of extensions: 1779
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)