Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O07
         (418 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   1.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   1.9  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    23   4.5  
U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase...    22   7.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    22   7.8  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 309 LAHDYVTPSWRQSWIRPWVKE 247
           LA+ Y   +WR+SW+ P  K+
Sbjct: 588 LANGYFPKAWRKSWMVPIYKK 608


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 1.9
 Identities = 14/58 (24%), Positives = 28/58 (48%)
 Frame = +1

Query: 199 TKINVAC*VKCHFNQILFHPRADPTLAPGGGHIVVGKLXTYNLILITLDNK*IIMMFF 372
           T + +      HF+Q+   P +DP L  GG  ++       NL  I++ ++ ++ + F
Sbjct: 425 TPVEICELFSAHFSQMFEPPVSDPNLIEGG--LLYTPENLINLSDISVSSETVVQVLF 480


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 9/19 (47%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
 Frame = +1

Query: 250 FHPRAD-PTLAPGGGHIVV 303
           +HP+    TL+ GGGH++V
Sbjct: 167 YHPKNTIKTLSHGGGHVMV 185


>U89800-1|AAD03793.1|  260|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 260

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 9/19 (47%), Positives = 13/19 (68%), Gaps = 1/19 (5%)
 Frame = +1

Query: 250 FHPRAD-PTLAPGGGHIVV 303
           +HP+    TL  GGGH++V
Sbjct: 95  YHPKNTIKTLKHGGGHVMV 113


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 22.2 bits (45), Expect = 7.8
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = +1

Query: 214 AC*VKCHFNQILFHPRADPTLAPGGGHIVVGKLXTYNLILITLDNK 351
           +C V  HF QI+          P    +V       N    T+DNK
Sbjct: 145 SCTVGVHFKQIVDREDGSFDEVPNSAFVVARTAFRDNSSYYTIDNK 190


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,854
Number of Sequences: 2352
Number of extensions: 6605
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)