Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O07
         (418 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK130623-1|BAC85397.1|  132|Homo sapiens protein ( Homo sapiens ...    31   2.0  
AK097085-1|BAC04945.1|  120|Homo sapiens protein ( Homo sapiens ...    30   3.6  
AK097214-1|BAC04976.1|  138|Homo sapiens protein ( Homo sapiens ...    29   8.2  

>AK130623-1|BAC85397.1|  132|Homo sapiens protein ( Homo sapiens
           cDNA FLJ27113 fis, clone SPL05845. ).
          Length = 132

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 311 NLPTTM*PPPGAKVGSALG*KSIWLK*HFTQH-ATFIFVIKGAFYSV 174
           NL +   PPPG K  S L   S W   H   H A F+F+++  F  V
Sbjct: 41  NLGSPQPPPPGFKRFSCLSLPSSWEYRHVPPHPANFLFLVETGFLHV 87


>AK097085-1|BAC04945.1|  120|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39766 fis, clone SPLEN2000307. ).
          Length = 120

 Score = 29.9 bits (64), Expect = 3.6
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -3

Query: 290 PPPGAKVGSALG*KSIWLK*HFTQH-ATFIFVIKGAFYSV 174
           PPPG K  S L   S W   H + H A F+F+++  F  V
Sbjct: 32  PPPGFKRFSCLSLPSSWDYKHVSPHPANFVFLVETGFLHV 71


>AK097214-1|BAC04976.1|  138|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39895 fis, clone SPLEN2016922. ).
          Length = 138

 Score = 28.7 bits (61), Expect = 8.2
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -3

Query: 311 NLPTTM*PPPGAKVGSALG*KSIWLK*HFTQHATFIFVI 195
           NL +   PPPG K  S LG  S W   H   HA  IFV+
Sbjct: 32  NLGSLQPPPPGFKRFSCLGLPSSWDYRH--HHAWLIFVL 68


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,667,910
Number of Sequences: 237096
Number of extensions: 956598
Number of successful extensions: 1251
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1251
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)