Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O04
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.2  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.2  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.2  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   5.0  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   5.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.0  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.6  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 495 ILYLTFHQVQLILYAKGIFIXFGICPCSFTSS 400
           +L +TF  +Q+++Y + IF+     P +  S+
Sbjct: 204 LLLITFTSLQIMVYLQHIFVKSRPSPATIISN 235


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 495 ILYLTFHQVQLILYAKGIFIXFGICPCSFTSS 400
           +L +TF  +Q+++Y + IF+     P +  S+
Sbjct: 204 LLLITFTSLQIMVYLQHIFVKSRPSPATIISN 235


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = -1

Query: 495 ILYLTFHQVQLILYAKGIFIXFGICPCSFTSS 400
           +L +TF  +Q+++Y + IF+     P +  S+
Sbjct: 524 LLLITFTSLQIMVYLQHIFVKSRPSPATIISN 555


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 596 YSTFLSLSRSSPNHTIKYQFSILIW 522
           Y+   S+   +P HT  Y   I +W
Sbjct: 111 YANASSVGSRNPIHTSSYMTGIWVW 135


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 596 YSTFLSLSRSSPNHTIKYQFSILIW 522
           Y+   S+   +P HT  Y   I +W
Sbjct: 344 YANASSVGSRNPIHTSSYMTGIWVW 368


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -2

Query: 596 YSTFLSLSRSSPNHTIKYQFSILIW 522
           Y+   S+   +P HT  Y   I +W
Sbjct: 344 YANASSVGSRNPIHTSSYMTGIWVW 368


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = -2

Query: 626 IILCIFKSKIYSTFLSLSR-----SSPNHTIKYQFSILIWFWSLVGFIK 495
           +I   ++   +S+FL +S      +SP   + Y+F I  +  SL+  IK
Sbjct: 541 MIFVTYQLYCWSSFLKISVLQSLWASPTCDLMYEFQIFTFLMSLLQSIK 589


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 13/55 (23%), Positives = 26/55 (47%)
 Frame = +3

Query: 204 FRGLFEVELCTKTIIIE*I*SNPTVERFIPADCIQS*KSRLRWRIMMKXLKRYPI 368
           FR + E+ + T  +I+E     P  ++ +  D I   K+     +M +  +RY +
Sbjct: 355 FRHITEITILTVQLIVEFAKRLPGFDKLLREDQIALLKACSSEVMMFRMARRYDV 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,498
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)