Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O02
         (667 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750...    34   0.12 
12_01_0107 - 843820-846335,846400-846511                               29   3.3  
05_07_0164 - 28099839-28099861,28100148-28100265,28100546-281007...    29   4.4  
03_06_0680 - 35497868-35497884,35498058-35501961                       28   7.7  
01_03_0151 - 13229861-13230347,13230442-13230540,13230701-132309...    28   7.7  

>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
            26475149-26475260,26475405-26475463,26475559-26475633,
            26475734-26475832,26476128-26476343,26476426-26476500,
            26476583-26476670,26476757-26476902,26477240-26477347,
            26477417-26478436,26478437-26478715,26479471-26480520,
            26480636-26480692,26480780-26480837,26481379-26481458,
            26481598-26481654,26481764-26481833,26481967-26482202,
            26482341-26482445,26482534-26482680,26482758-26482823,
            26482916-26482979,26484040-26484200,26484308-26484400,
            26484487-26484600,26484684-26484803,26484893-26484976,
            26485061-26485216,26485389-26485811
          Length = 1885

 Score = 33.9 bits (74), Expect = 0.12
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = +1

Query: 307  LTTNGTVLKEKFHPYFDCTMTSFFNLMSEVLASRWSTSRRRWILASRSF 453
            +T   T++KE FH     T    F   SEV++  +    R+WI  SRS+
Sbjct: 1148 MTNLATIIKESFHQVQRVTTVELFAFCSEVIS--FGQDLRKWIYESRSY 1194


>12_01_0107 - 843820-846335,846400-846511
          Length = 875

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 504 MAPQTTVNTGQPLHSQDSNMSTGSSHSDKXV 596
           +AP T  N     H++ SN+STG S ++K +
Sbjct: 52  VAPATNTNAESGEHNEFSNISTGDSQNNKLI 82


>05_07_0164 -
           28099839-28099861,28100148-28100265,28100546-28100770,
           28100843-28101015,28101292-28101385,28102957-28103048,
           28103370-28103400
          Length = 251

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = -1

Query: 361 YSQNMDEISP*EQSHLWSNFKIKSHITSLECITIFFSFSSAEYENGDEIYLNC 203
           ++Q  +++   E S  W  +    H T +EC    +    +  E  +E YL+C
Sbjct: 115 FTQQTNDLLLFESSTKWGCYNCAVHFTRMECSKSIYMDGRSVSEFEEECYLDC 167


>03_06_0680 - 35497868-35497884,35498058-35501961
          Length = 1306

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = -3

Query: 461  CXEKLLLARIQRRLEVLHLDASTSDIKLKKLVMVQSKYG 345
            C E L + R  R LEVLHL  S   +++ K   +QS  G
Sbjct: 1176 CLESLAIKRCDR-LEVLHLPPSIKKLEILKCENLQSLSG 1213


>01_03_0151 -
           13229861-13230347,13230442-13230540,13230701-13230918,
           13231210-13231317,13231366-13231518,13232962-13233015,
           13233276-13233374,13234458-13234551,13234638-13234715,
           13237696-13237766,13238321-13238416,13238505-13238582,
           13238683-13238751,13238830-13238897,13239038-13239115,
           13239190-13239289,13240002-13240061,13240488-13240579,
           13241730-13241779,13241870-13241954,13242035-13242134,
           13242933-13243013,13244827-13244907
          Length = 832

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 11/35 (31%), Positives = 22/35 (62%)
 Frame = +3

Query: 210 KYISSPFSYSADEKLKKIVIHSSEVICDFILKFDH 314
           +YI      +  E LK+++I+++E   D ++KF+H
Sbjct: 518 EYIRKVHVQNYQEGLKQLIIYANESFWDQLMKFEH 552


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,379,376
Number of Sequences: 37544
Number of extensions: 279106
Number of successful extensions: 568
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1679486824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)