Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O02
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    26   0.28 
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    26   0.28 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    22   6.0  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    21   8.0  

>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 295 KSHITSLECITIFFSFSSAEYENGDEIYL 209
           K  +TS E   + + F    YEN  E+YL
Sbjct: 116 KKEVTSTEGCEVAWQFGKCIYENDKELYL 144


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 295 KSHITSLECITIFFSFSSAEYENGDEIYL 209
           K  +TS E   + + F    YEN  E+YL
Sbjct: 90  KKEVTSTEGCEVAWQFGKCIYENDKELYL 118


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 5/23 (21%), Positives = 15/23 (65%)
 Frame = -1

Query: 364 WYSQNMDEISP*EQSHLWSNFKI 296
           W+ +++  I P ++ ++W + +I
Sbjct: 131 WFKKSVQRIKPYDEYYVWRDARI 153


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 303 KFDHKWDCS*GEISSIF*LYHDKFLQFDV 389
           KFD  W    G I++I  +   K L FD+
Sbjct: 135 KFDRLWVLDSGLINNIQLMCSPKLLAFDL 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,865
Number of Sequences: 438
Number of extensions: 3390
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)