Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_O01
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    27   0.34 
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    24   3.1  
AY752896-1|AAV30070.1|  105|Anopheles gambiae peroxidase 4A prot...    23   7.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   7.2  

>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 16/54 (29%), Positives = 22/54 (40%)
 Frame = +1

Query: 157  KKIRMGQGRAAEPEEFQDSGEDWTPDADSNEPASRTGRKRVSKAPVNNTKKKRK 318
            KK R  QG     +  + +      D+DS E      RKR  K      KK++K
Sbjct: 943  KKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQK 996


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -1

Query: 320 FLRFFLVLFTGAFDTRFLPV 261
           +L  FL +F   FDT F P+
Sbjct: 428 YLEAFLSVFQNCFDTGFFPI 447


>AY752896-1|AAV30070.1|  105|Anopheles gambiae peroxidase 4A
           protein.
          Length = 105

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +3

Query: 498 LAEIXCKWDGDTVISKLDELNL 563
           LA++   WD +TV  +  +LN+
Sbjct: 26  LADLNAGWDDETVFQQARKLNI 47


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 202 ILLVQRPCPDPSESSSF 152
           ++L+Q+P   P ESSSF
Sbjct: 494 LVLLQKPGKPPGESSSF 510


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 513,561
Number of Sequences: 2352
Number of extensions: 8619
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)