Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N24
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 110 3e-24
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 110 3e-24
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 110 3e-24
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 110 3e-24
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 110 3e-24
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 110 3e-24
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 110 3e-24
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 110 3e-24
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 36 0.066
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 36 0.066
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 36 0.066
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 36 0.066
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 36 0.066
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 36 0.066
AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein pr... 35 0.15
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 33 0.35
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 32 1.1
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 32 1.1
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 32 1.1
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 32 1.1
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 32 1.1
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 32 1.1
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 32 1.1
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 32 1.1
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 32 1.1
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 1.4
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 1.4
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 1.4
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 31 1.9
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 31 1.9
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 31 1.9
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 31 1.9
U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein. 29 10.0
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 110 bits (264), Expect = 3e-24
Identities = 57/109 (52%), Positives = 71/109 (65%), Gaps = 3/109 (2%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 249 VGGGXXXXXX--XXXXXXXXXEEXKEDKKXXXKEXS-ESDDDMGFGLFD 386
GG E+KK KE S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 35.9 bits (79), Expect = 0.066
Identities = 19/47 (40%), Positives = 21/47 (44%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
P G EE K + K +E ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 34.7 bits (76), Expect = 0.15
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +1
Query: 97 PRQLPLTLRRS-----SAPSVSKLTVRSLRK*SLSSTARMLNNLLRPDVRSCRQC 246
P QLPL+LRR S PS S +RSL S +S++R + RSC +C
Sbjct: 66 PAQLPLSLRRRCSRPRSRPSSSSRAIRSLWSRSRTSSSRWFTSDTSSSSRSCSRC 120
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 33.5 bits (73), Expect = 0.35
Identities = 18/46 (39%), Positives = 20/46 (43%)
Frame = +3
Query: 246 PVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLF 383
P G EE K + K +E ESDDDMGFGLF
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLF 113
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 235 KVEAKEESEESDEDMGFGLFD 255
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 137 KVEAKEESEESDEDMGFGLFD 157
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 234 KVEAKEESEESDEDMGFGLFD 254
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 31.9 bits (69), Expect = 1.1
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
K +E ESD+DMGFGLFD
Sbjct: 297 KVEAKEESEESDEDMGFGLFD 317
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 248
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 248
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 90 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 248
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 256 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 79 A 77
+
Sbjct: 723 S 723
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 256 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 79 A 77
+
Sbjct: 723 S 723
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 256 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 79 A 77
+
Sbjct: 201 S 201
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 256 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 79 A 77
+
Sbjct: 361 S 361
>U33839-1|AAA75594.1| 264|Homo sapiens potassium channel protein.
Length = 264
Score = 28.7 bits (61), Expect = 10.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 241 DDSFSRPAAISCSTSLPLSSVITF-LSFSPSASIPTELRIFSTSA 110
D RP AISC ++ SS I + + F S+ +P ++ ST+A
Sbjct: 126 DSGGIRPCAISCDKNVTTSSAICWHMGFWLSSILPASGKLVSTTA 170
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,728,292
Number of Sequences: 237096
Number of extensions: 747453
Number of successful extensions: 2175
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 2086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2158
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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