Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N24
(455 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein prot... 119 2e-27
AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB... 119 2e-27
AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA... 119 2e-27
X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal pr... 118 3e-27
AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p pro... 118 3e-27
S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosom... 39 0.003
AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p pro... 39 0.003
AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA ... 39 0.003
Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein ( Dros... 38 0.006
M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair pro... 38 0.008
BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p pro... 38 0.008
AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p pro... 38 0.008
AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA... 38 0.008
AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p pro... 30 1.7
AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p pro... 30 1.7
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 30 1.7
X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein. 29 3.9
M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless prote... 29 3.9
BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p pro... 29 3.9
AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-P... 29 3.9
AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC... 29 3.9
AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB... 29 3.9
AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD... 29 3.9
AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA... 29 3.9
AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-P... 28 6.8
AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-P... 28 6.8
AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-P... 27 9.1
>X05016-1|CAA28672.1| 113|Drosophila melanogaster r-protein
protein.
Length = 113
Score = 119 bits (286), Expect = 2e-27
Identities = 63/107 (58%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSES-DDDMGFGLFD 386
VGGG + KE KK KE SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>AE013599-2313|AAS64838.1| 113|Drosophila melanogaster CG4918-PB,
isoform B protein.
Length = 113
Score = 119 bits (286), Expect = 2e-27
Identities = 63/107 (58%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSES-DDDMGFGLFD 386
VGGG + KE KK KE SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>AE013599-2312|AAF57979.1| 113|Drosophila melanogaster CG4918-PA,
isoform A protein.
Length = 113
Score = 119 bits (286), Expect = 2e-27
Identities = 63/107 (58%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLAVLGGK +PA +D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSES-DDDMGFGLFD 386
VGGG + KE KK KE SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>X05466-1|CAA29026.1| 113|Drosophila melanogaster r ribosomal
protein protein.
Length = 113
Score = 118 bits (285), Expect = 3e-27
Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLAVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSES-DDDMGFGLFD 386
VGGG + KE KK KE SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>AY119253-1|AAM51113.1| 113|Drosophila melanogaster SD22208p
protein.
Length = 113
Score = 118 bits (285), Expect = 3e-27
Identities = 63/107 (58%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLAVLGGK +PA D+EKILSSVG+E D E+L KVI EL GK ++ LI GREKLSSMP
Sbjct: 7 YLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKLSSMP 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSES-DDDMGFGLFD 386
VGGG + KE KK KE SES DDDMGF LF+
Sbjct: 67 VGGGGAVAAVDAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>S62170-1|AAB26902.1| 112|Drosophila melanogaster acidic ribosomal
protein rpA2 protein.
Length = 112
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = +3
Query: 117 VEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 296
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAA- 86
Query: 297 XXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
E K+++K +E +SDDDMGFGLFD
Sbjct: 87 ----ESKKEEKKKEEESDQSDDDMGFGLFD 112
>AY069125-1|AAL39270.1| 112|Drosophila melanogaster GH13422p
protein.
Length = 112
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = +3
Query: 117 VEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 296
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAA- 86
Query: 297 XXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
E K+++K +E +SDDDMGFGLFD
Sbjct: 87 ----ESKKEEKKKEEESDQSDDDMGFGLFD 112
>AE014134-102|AAF51499.1| 112|Drosophila melanogaster CG4087-PA
protein.
Length = 112
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/90 (28%), Positives = 39/90 (43%)
Frame = +3
Query: 117 VEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXX 296
+ IL + +E + L G +V+ LI + + P GG
Sbjct: 28 INTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSGVGAAPAGGAAPAAAAAAPAA- 86
Query: 297 XXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
E K+++K +E +SDDDMGFGLFD
Sbjct: 87 ----ESKKEEKKKEEESDQSDDDMGFGLFD 112
>Y00504-1|CAA68557.1| 112|Drosophila melanogaster protein (
Drosophila melanogastermRNA for A-type ribosomal protein
rp21C. ).
Length = 112
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/72 (33%), Positives = 35/72 (48%)
Frame = +3
Query: 171 KVITELNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXS 350
K + +N KD+ I +G + + P GG E K+++K +E
Sbjct: 49 KALEAINVKDLITNIGSG---VGAAPAGGAAPAAAAAAPAA-----ESKKEEKKKEEESD 100
Query: 351 ESDDDMGFGLFD 386
+SDDDMGFGLFD
Sbjct: 101 QSDDDMGFGLFD 112
>M25772-1|AAA53372.1| 317|Drosophila melanogaster DNA repair
protein protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 309 EXKEDKKXXXKEXSESDDDMGFGLFD 386
E KE+ K E E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 200 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 90
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>BT021447-1|AAX33595.1| 317|Drosophila melanogaster GH01513p
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 309 EXKEDKKXXXKEXSESDDDMGFGLFD 386
E KE+ K E E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 200 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 90
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AY075528-1|AAL68335.1| 317|Drosophila melanogaster RE74511p
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 309 EXKEDKKXXXKEXSESDDDMGFGLFD 386
E KE+ K E E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 200 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 90
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AE014296-3653|AAF51807.1| 317|Drosophila melanogaster CG7490-PA
protein.
Length = 317
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +3
Query: 309 EXKEDKKXXXKEXSESDDDMGFGLFD 386
E KE+ K E E DDDMGFGLFD
Sbjct: 292 EKKEEAKKPESESEEEDDDMGFGLFD 317
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -1
Query: 200 ILAVELSDYFLKLLTVSFDTDGAEDLLNVSGSWRGLA 90
I VEL D F K V D G++ + N+ S RGLA
Sbjct: 15 IKVVELFDEFPKCFIVGADNVGSKQMQNIRTSLRGLA 51
>AY069572-1|AAL39717.1| 510|Drosophila melanogaster LD31122p
protein.
Length = 510
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 104
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460
>AY060416-1|AAL25455.1| 358|Drosophila melanogaster LD37618p
protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 104
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAA 104
PPP GI++ + + + LPL+ + T + S S++ T I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630
>X67239-1|CAA47664.1| 1077|Drosophila melanogaster hairless protein.
Length = 1077
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 79 ASK 71
ASK
Sbjct: 163 ASK 165
>M95192-1|AAA28607.1| 1059|Drosophila melanogaster hairless protein
protein.
Length = 1059
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 87 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 144
Query: 79 ASK 71
ASK
Sbjct: 145 ASK 147
>BT015220-1|AAT94449.1| 1077|Drosophila melanogaster RE41617p
protein.
Length = 1077
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 79 ASK 71
ASK
Sbjct: 163 ASK 165
>AE014297-3702|AAF56388.3| 977|Drosophila melanogaster CG11819-PA
protein.
Length = 977
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 117 VEKILSSVGIEADGEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 257
V KIL G++ + +K++ +T +GK +LI L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294
>AE014297-2832|AAN14358.1| 1059|Drosophila melanogaster CG5460-PC,
isoform C protein.
Length = 1059
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 87 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 144
Query: 79 ASK 71
ASK
Sbjct: 145 ASK 147
>AE014297-2831|AAF55791.1| 1059|Drosophila melanogaster CG5460-PB,
isoform B protein.
Length = 1059
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 87 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 144
Query: 79 ASK 71
ASK
Sbjct: 145 ASK 147
>AE014297-2830|AAN14357.1| 1077|Drosophila melanogaster CG5460-PD,
isoform D protein.
Length = 1077
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 79 ASK 71
ASK
Sbjct: 163 ASK 165
>AE014297-2829|AAF55790.1| 1077|Drosophila melanogaster CG5460-PA,
isoform A protein.
Length = 1077
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/63 (31%), Positives = 28/63 (44%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPST 80
PPP + + SR + +T+ SS F P A P I + SAA + +T
Sbjct: 105 PPP--LPANLSRTTTPTTTTTPSSSSSTASNGFLPHAKTPKSSSIMAASAAVAASVVGAT 162
Query: 79 ASK 71
ASK
Sbjct: 163 ASK 165
>AE013599-3680|AAF47056.1| 157|Drosophila melanogaster CG12491-PA
protein.
Length = 157
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 235 SFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 74
S S P++ S STS P S+ T S S +S + STS+ PST+S
Sbjct: 47 SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
>AE013599-3679|ABI31112.1| 157|Drosophila melanogaster CG34105-PA
protein.
Length = 157
Score = 27.9 bits (59), Expect = 6.8
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -2
Query: 235 SFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 74
S S P++ S STS P S+ T S S +S + STS+ PST+S
Sbjct: 47 SSSTPSS-SSSTSTPSSNSTTSTSSSTPSSSSSTSPTSSTSSTTATTTAPSTSS 99
>AE014298-1439|AAF46576.2| 313|Drosophila melanogaster CG15307-PA
protein.
Length = 313
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 223 PAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 89
P S +L +V TF++ + S + PT + ++ T + +V+P
Sbjct: 154 PIPTSTMATLQAQTVATFIAATGSKNRPTTIVVYPTVSPESIVIP 198
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,735,010
Number of Sequences: 53049
Number of extensions: 241104
Number of successful extensions: 966
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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